Protein–RNA interactions for Protein: O88322

Nid2, Nidogen-2, mousemouse

Predictions only

Length 1,403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nid2O88322 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nid2O88322 Gm24158-201ENSMUST00000175263 71 ntBASIC20.51■□□□□ 0.87
Nid2O88322 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Nid2O88322 Arhgef33-209ENSMUST00000225223 714 ntBASIC20.51■□□□□ 0.87
Nid2O88322 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Nid2O88322 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nid2O88322 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Nid2O88322 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Nid2O88322 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Nid2O88322 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Nid2O88322 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Nid2O88322 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Nid2O88322 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Nid2O88322 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Nid2O88322 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Nid2O88322 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Nid2O88322 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Nid2O88322 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
Nid2O88322 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC20.5■□□□□ 0.87
Nid2O88322 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Nid2O88322 Mir6977-201ENSMUST00000184960 64 ntBASIC20.5■□□□□ 0.87
Nid2O88322 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Nid2O88322 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC20.5■□□□□ 0.87
Nid2O88322 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Nid2O88322 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC20.5■□□□□ 0.87
Nid2O88322 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nid2O88322 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nid2O88322 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Nid2O88322 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nid2O88322 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nid2O88322 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nid2O88322 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nid2O88322 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC20.49■□□□□ 0.87
Nid2O88322 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Nid2O88322 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC20.49■□□□□ 0.87
Nid2O88322 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC20.49■□□□□ 0.87
Nid2O88322 Gm5745-201ENSMUST00000183748 313 ntBASIC20.49■□□□□ 0.87
Nid2O88322 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC20.49■□□□□ 0.87
Nid2O88322 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC20.49■□□□□ 0.87
Nid2O88322 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Nid2O88322 AC140375.2-201ENSMUST00000225283 584 ntBASIC20.49■□□□□ 0.87
Nid2O88322 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Nid2O88322 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Nid2O88322 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Nid2O88322 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nid2O88322 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Nid2O88322 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
Nid2O88322 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nid2O88322 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nid2O88322 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Nid2O88322 Gm27430-201ENSMUST00000184585 107 ntBASIC20.48■□□□□ 0.87
Nid2O88322 Gm44333-201ENSMUST00000197168 107 ntBASIC20.48■□□□□ 0.87
Nid2O88322 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nid2O88322 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nid2O88322 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC20.48■□□□□ 0.87
Nid2O88322 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nid2O88322 Haglr-201ENSMUST00000100000 2085 ntBASIC20.48■□□□□ 0.87
Nid2O88322 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC20.48■□□□□ 0.87
Nid2O88322 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nid2O88322 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC20.48■□□□□ 0.87
Nid2O88322 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nid2O88322 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nid2O88322 Dapk1-207ENSMUST00000226059 5009 ntBASIC20.48■□□□□ 0.87
Nid2O88322 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nid2O88322 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nid2O88322 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nid2O88322 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
Nid2O88322 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nid2O88322 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nid2O88322 Gm13223-201ENSMUST00000118609 747 ntBASIC20.47■□□□□ 0.87
Nid2O88322 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC20.47■□□□□ 0.87
Nid2O88322 Gm27437-201ENSMUST00000183429 107 ntBASIC20.47■□□□□ 0.87
Nid2O88322 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Nid2O88322 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Nid2O88322 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nid2O88322 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nid2O88322 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Nid2O88322 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nid2O88322 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Nid2O88322 Gm8318-201ENSMUST00000182954 872 ntBASIC20.46■□□□□ 0.87
Nid2O88322 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC20.46■□□□□ 0.87
Nid2O88322 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nid2O88322 AC125206.2-201ENSMUST00000217454 574 ntBASIC20.46■□□□□ 0.87
Nid2O88322 AC166341.4-201ENSMUST00000220625 123 ntBASIC20.46■□□□□ 0.87
Nid2O88322 CT030684.1-201ENSMUST00000227292 914 ntBASIC20.46■□□□□ 0.87
Nid2O88322 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nid2O88322 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
Nid2O88322 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nid2O88322 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nid2O88322 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nid2O88322 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nid2O88322 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nid2O88322 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nid2O88322 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
Nid2O88322 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nid2O88322 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Nid2O88322 Gm5779-201ENSMUST00000218467 910 ntBASIC20.45■□□□□ 0.86
Nid2O88322 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nid2O88322 Gm15635-204ENSMUST00000208024 2539 ntBASIC20.45■□□□□ 0.86
Nid2O88322 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms