Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Col5a1O88207 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Col5a1O88207 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Col5a1O88207 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.14
Col5a1O88207 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Col5a1O88207 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col5a1O88207 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col5a1O88207 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC14.2□□□□□ -0.14
Col5a1O88207 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC14.2□□□□□ -0.14
Col5a1O88207 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC14.2□□□□□ -0.14
Col5a1O88207 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC14.2□□□□□ -0.14
Col5a1O88207 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Col5a1O88207 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col5a1O88207 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Col5a1O88207 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col5a1O88207 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col5a1O88207 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Col5a1O88207 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col5a1O88207 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col5a1O88207 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Col5a1O88207 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col5a1O88207 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col5a1O88207 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Col5a1O88207 Gm13823-201ENSMUST00000119930 345 ntBASIC14.2□□□□□ -0.14
Col5a1O88207 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC14.2□□□□□ -0.14
Col5a1O88207 Gm45747-201ENSMUST00000212203 999 ntBASIC14.2□□□□□ -0.14
Col5a1O88207 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC14.2□□□□□ -0.14
Col5a1O88207 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col5a1O88207 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col5a1O88207 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col5a1O88207 Gm43072-201ENSMUST00000200283 1671 ntBASIC14.19□□□□□ -0.14
Col5a1O88207 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col5a1O88207 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Col5a1O88207 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Col5a1O88207 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col5a1O88207 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col5a1O88207 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC14.19□□□□□ -0.14
Col5a1O88207 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
Col5a1O88207 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col5a1O88207 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC14.19□□□□□ -0.14
Col5a1O88207 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC14.19□□□□□ -0.14
Col5a1O88207 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Col5a1O88207 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Col5a1O88207 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC14.19□□□□□ -0.14
Col5a1O88207 Gm27437-201ENSMUST00000183429 107 ntBASIC14.19□□□□□ -0.14
Col5a1O88207 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC14.19□□□□□ -0.14
Col5a1O88207 Gm18246-201ENSMUST00000221023 728 ntBASIC14.19□□□□□ -0.14
Col5a1O88207 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col5a1O88207 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Col5a1O88207 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Col5a1O88207 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Col5a1O88207 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col5a1O88207 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Col5a1O88207 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC14.19□□□□□ -0.14
Col5a1O88207 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col5a1O88207 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col5a1O88207 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col5a1O88207 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
Col5a1O88207 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col5a1O88207 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Col5a1O88207 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col5a1O88207 Gm2423-201ENSMUST00000074863 733 ntBASIC14.18□□□□□ -0.14
Col5a1O88207 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Col5a1O88207 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col5a1O88207 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC14.18□□□□□ -0.14
Col5a1O88207 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Col5a1O88207 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col5a1O88207 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC14.18□□□□□ -0.14
Col5a1O88207 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col5a1O88207 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Col5a1O88207 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Col5a1O88207 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC14.18□□□□□ -0.14
Col5a1O88207 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col5a1O88207 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col5a1O88207 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col5a1O88207 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col5a1O88207 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC14.18□□□□□ -0.14
Col5a1O88207 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC14.18□□□□□ -0.14
Col5a1O88207 Gm22175-201ENSMUST00000175007 78 ntBASIC14.18□□□□□ -0.14
Col5a1O88207 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Col5a1O88207 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Col5a1O88207 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC14.18□□□□□ -0.14
Col5a1O88207 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC14.18□□□□□ -0.14
Col5a1O88207 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col5a1O88207 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col5a1O88207 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC14.17□□□□□ -0.14
Col5a1O88207 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col5a1O88207 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col5a1O88207 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col5a1O88207 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col5a1O88207 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC14.17□□□□□ -0.14
Col5a1O88207 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Col5a1O88207 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC14.17□□□□□ -0.14
Col5a1O88207 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC14.17□□□□□ -0.14
Col5a1O88207 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Col5a1O88207 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Col5a1O88207 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC14.17□□□□□ -0.14
Col5a1O88207 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col5a1O88207 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Col5a1O88207 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 74 ms