Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trdmt1O55055 Gm12892-201ENSMUST00000117367 1146 ntBASIC17.4■□□□□ 0.38
Trdmt1O55055 Mir1895-201ENSMUST00000122615 79 ntBASIC17.4■□□□□ 0.38
Trdmt1O55055 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Trdmt1O55055 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trdmt1O55055 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trdmt1O55055 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC17.4■□□□□ 0.38
Trdmt1O55055 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Trdmt1O55055 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trdmt1O55055 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Trdmt1O55055 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
Trdmt1O55055 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trdmt1O55055 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trdmt1O55055 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trdmt1O55055 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trdmt1O55055 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Trdmt1O55055 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Trdmt1O55055 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
Trdmt1O55055 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Trdmt1O55055 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Trdmt1O55055 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trdmt1O55055 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Trdmt1O55055 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trdmt1O55055 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trdmt1O55055 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trdmt1O55055 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC17.39■□□□□ 0.37
Trdmt1O55055 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trdmt1O55055 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC17.39■□□□□ 0.37
Trdmt1O55055 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC17.39■□□□□ 0.37
Trdmt1O55055 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trdmt1O55055 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trdmt1O55055 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trdmt1O55055 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trdmt1O55055 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trdmt1O55055 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trdmt1O55055 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trdmt1O55055 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trdmt1O55055 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trdmt1O55055 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trdmt1O55055 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.38■□□□□ 0.37
Trdmt1O55055 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trdmt1O55055 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trdmt1O55055 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trdmt1O55055 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC17.38■□□□□ 0.37
Trdmt1O55055 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trdmt1O55055 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Trdmt1O55055 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
Trdmt1O55055 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trdmt1O55055 Gm15427-201ENSMUST00000117288 531 ntBASIC17.38■□□□□ 0.37
Trdmt1O55055 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC17.38■□□□□ 0.37
Trdmt1O55055 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trdmt1O55055 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC17.38■□□□□ 0.37
Trdmt1O55055 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trdmt1O55055 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trdmt1O55055 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trdmt1O55055 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trdmt1O55055 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trdmt1O55055 AC119177.1-201ENSMUST00000227647 1332 ntBASIC17.38■□□□□ 0.37
Trdmt1O55055 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trdmt1O55055 Rbfox2-206ENSMUST00000227314 1810 ntBASIC17.37■□□□□ 0.37
Trdmt1O55055 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trdmt1O55055 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trdmt1O55055 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trdmt1O55055 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trdmt1O55055 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trdmt1O55055 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Trdmt1O55055 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Trdmt1O55055 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Trdmt1O55055 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Trdmt1O55055 Gm27301-201ENSMUST00000184012 127 ntBASIC17.37■□□□□ 0.37
Trdmt1O55055 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Trdmt1O55055 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC17.37■□□□□ 0.37
Trdmt1O55055 AC155252.2-201ENSMUST00000226946 680 ntBASIC17.37■□□□□ 0.37
Trdmt1O55055 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trdmt1O55055 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trdmt1O55055 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trdmt1O55055 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Trdmt1O55055 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
Trdmt1O55055 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trdmt1O55055 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC17.37■□□□□ 0.37
Trdmt1O55055 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trdmt1O55055 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trdmt1O55055 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trdmt1O55055 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trdmt1O55055 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trdmt1O55055 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Trdmt1O55055 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trdmt1O55055 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC17.36■□□□□ 0.37
Trdmt1O55055 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trdmt1O55055 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.36■□□□□ 0.37
Trdmt1O55055 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trdmt1O55055 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trdmt1O55055 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC17.36■□□□□ 0.37
Trdmt1O55055 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC17.36■□□□□ 0.37
Trdmt1O55055 Gm7063-201ENSMUST00000186840 981 ntBASIC17.36■□□□□ 0.37
Trdmt1O55055 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC17.36■□□□□ 0.37
Trdmt1O55055 Gm45612-201ENSMUST00000211320 160 ntBASIC17.36■□□□□ 0.37
Trdmt1O55055 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
Trdmt1O55055 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trdmt1O55055 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms