Protein–RNA interactions for Protein: O54990

Prom1, Prominin-1, mousemouse

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prom1O54990 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Prom1O54990 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Prom1O54990 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Prom1O54990 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Prom1O54990 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC17.44■□□□□ 0.38
Prom1O54990 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Prom1O54990 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Prom1O54990 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Prom1O54990 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Prom1O54990 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Prom1O54990 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Prom1O54990 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Prom1O54990 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.43■□□□□ 0.38
Prom1O54990 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC17.43■□□□□ 0.38
Prom1O54990 Gm13216-201ENSMUST00000117145 591 ntBASIC17.43■□□□□ 0.38
Prom1O54990 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC17.43■□□□□ 0.38
Prom1O54990 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Prom1O54990 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC17.43■□□□□ 0.38
Prom1O54990 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC17.43■□□□□ 0.38
Prom1O54990 AC151836.1-202ENSMUST00000226259 753 ntBASIC17.43■□□□□ 0.38
Prom1O54990 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Prom1O54990 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC17.43■□□□□ 0.38
Prom1O54990 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Prom1O54990 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Prom1O54990 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Prom1O54990 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
Prom1O54990 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Prom1O54990 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Prom1O54990 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Prom1O54990 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Prom1O54990 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Prom1O54990 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Prom1O54990 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC17.42■□□□□ 0.38
Prom1O54990 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC17.42■□□□□ 0.38
Prom1O54990 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Prom1O54990 Gm6257-201ENSMUST00000163864 910 ntBASIC17.42■□□□□ 0.38
Prom1O54990 Gm17271-201ENSMUST00000165535 355 ntBASIC17.42■□□□□ 0.38
Prom1O54990 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Prom1O54990 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC17.42■□□□□ 0.38
Prom1O54990 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC17.42■□□□□ 0.38
Prom1O54990 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Prom1O54990 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Prom1O54990 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Prom1O54990 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Prom1O54990 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Prom1O54990 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Prom1O54990 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Prom1O54990 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC17.42■□□□□ 0.38
Prom1O54990 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Prom1O54990 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Prom1O54990 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Prom1O54990 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Prom1O54990 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Prom1O54990 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Prom1O54990 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC17.41■□□□□ 0.38
Prom1O54990 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Prom1O54990 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Prom1O54990 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Prom1O54990 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
Prom1O54990 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Prom1O54990 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Prom1O54990 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
Prom1O54990 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Prom1O54990 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC17.41■□□□□ 0.38
Prom1O54990 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC17.41■□□□□ 0.38
Prom1O54990 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC17.41■□□□□ 0.38
Prom1O54990 AC124549.3-201ENSMUST00000225541 367 ntBASIC17.41■□□□□ 0.38
Prom1O54990 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Prom1O54990 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Prom1O54990 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Prom1O54990 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Prom1O54990 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Prom1O54990 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Prom1O54990 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Prom1O54990 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Prom1O54990 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Prom1O54990 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Prom1O54990 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Prom1O54990 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Prom1O54990 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Prom1O54990 Gm14701-201ENSMUST00000117156 348 ntBASIC17.4■□□□□ 0.38
Prom1O54990 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC17.4■□□□□ 0.38
Prom1O54990 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Prom1O54990 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Prom1O54990 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Prom1O54990 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Prom1O54990 Gm45747-201ENSMUST00000212203 999 ntBASIC17.4■□□□□ 0.38
Prom1O54990 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
Prom1O54990 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Prom1O54990 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Prom1O54990 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Prom1O54990 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Prom1O54990 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.38
Prom1O54990 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC17.39■□□□□ 0.37
Prom1O54990 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Prom1O54990 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Prom1O54990 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC17.39■□□□□ 0.37
Prom1O54990 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Prom1O54990 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Prom1O54990 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms