Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC18.88■□□□□ 0.61
Smarce1O54941 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Smarce1O54941 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smarce1O54941 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smarce1O54941 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smarce1O54941 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smarce1O54941 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smarce1O54941 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smarce1O54941 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smarce1O54941 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smarce1O54941 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC18.87■□□□□ 0.61
Smarce1O54941 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
Smarce1O54941 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC18.87■□□□□ 0.61
Smarce1O54941 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Smarce1O54941 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smarce1O54941 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC18.87■□□□□ 0.61
Smarce1O54941 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
Smarce1O54941 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
Smarce1O54941 AC112142.1-201ENSMUST00000228796 918 ntBASIC18.87■□□□□ 0.61
Smarce1O54941 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smarce1O54941 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smarce1O54941 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smarce1O54941 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smarce1O54941 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smarce1O54941 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smarce1O54941 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smarce1O54941 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smarce1O54941 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smarce1O54941 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smarce1O54941 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smarce1O54941 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Smarce1O54941 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smarce1O54941 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
Smarce1O54941 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Smarce1O54941 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC18.86■□□□□ 0.61
Smarce1O54941 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC18.86■□□□□ 0.61
Smarce1O54941 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smarce1O54941 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smarce1O54941 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smarce1O54941 Gm9867-201ENSMUST00000192212 2647 ntBASIC18.86■□□□□ 0.61
Smarce1O54941 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC18.86■□□□□ 0.61
Smarce1O54941 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC18.86■□□□□ 0.61
Smarce1O54941 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smarce1O54941 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smarce1O54941 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Smarce1O54941 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smarce1O54941 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smarce1O54941 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smarce1O54941 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smarce1O54941 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smarce1O54941 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smarce1O54941 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Smarce1O54941 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smarce1O54941 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC18.85■□□□□ 0.61
Smarce1O54941 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC18.85■□□□□ 0.61
Smarce1O54941 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Smarce1O54941 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Smarce1O54941 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smarce1O54941 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smarce1O54941 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Smarce1O54941 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smarce1O54941 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC18.85■□□□□ 0.61
Smarce1O54941 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC18.85■□□□□ 0.61
Smarce1O54941 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC18.85■□□□□ 0.61
Smarce1O54941 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Smarce1O54941 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Smarce1O54941 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Smarce1O54941 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smarce1O54941 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC18.85■□□□□ 0.61
Smarce1O54941 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smarce1O54941 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smarce1O54941 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smarce1O54941 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smarce1O54941 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smarce1O54941 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smarce1O54941 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
Smarce1O54941 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC18.84■□□□□ 0.61
Smarce1O54941 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smarce1O54941 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smarce1O54941 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smarce1O54941 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smarce1O54941 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smarce1O54941 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Smarce1O54941 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC18.84■□□□□ 0.61
Smarce1O54941 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smarce1O54941 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smarce1O54941 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smarce1O54941 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC18.84■□□□□ 0.61
Smarce1O54941 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smarce1O54941 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smarce1O54941 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smarce1O54941 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smarce1O54941 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Smarce1O54941 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smarce1O54941 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smarce1O54941 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Smarce1O54941 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC18.83■□□□□ 0.61
Smarce1O54941 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Smarce1O54941 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Smarce1O54941 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms