Protein–RNA interactions for Protein: O35701

Matn3, Matrilin-3, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn3O35701 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Matn3O35701 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Matn3O35701 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Matn3O35701 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC14.46□□□□□ -0.1
Matn3O35701 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Matn3O35701 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Matn3O35701 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Matn3O35701 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Matn3O35701 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Matn3O35701 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Matn3O35701 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Matn3O35701 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Matn3O35701 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Matn3O35701 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC14.45□□□□□ -0.1
Matn3O35701 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Matn3O35701 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC14.45□□□□□ -0.1
Matn3O35701 Slc35b2-202ENSMUST00000223987 1766 ntBASIC14.45□□□□□ -0.1
Matn3O35701 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Matn3O35701 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Matn3O35701 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
Matn3O35701 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Matn3O35701 Gm11249-201ENSMUST00000117071 859 ntBASIC14.45□□□□□ -0.1
Matn3O35701 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Matn3O35701 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Matn3O35701 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Matn3O35701 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Matn3O35701 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Matn3O35701 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Matn3O35701 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Matn3O35701 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Matn3O35701 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Matn3O35701 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Matn3O35701 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Matn3O35701 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Matn3O35701 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Matn3O35701 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Matn3O35701 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Matn3O35701 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Matn3O35701 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC14.45□□□□□ -0.1
Matn3O35701 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Matn3O35701 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Matn3O35701 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Matn3O35701 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Matn3O35701 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Matn3O35701 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Matn3O35701 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Matn3O35701 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Matn3O35701 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Matn3O35701 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Matn3O35701 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Matn3O35701 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Matn3O35701 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Matn3O35701 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Matn3O35701 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Matn3O35701 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Matn3O35701 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC14.44□□□□□ -0.1
Matn3O35701 Gm9731-201ENSMUST00000209480 747 ntBASIC14.44□□□□□ -0.1
Matn3O35701 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC14.44□□□□□ -0.1
Matn3O35701 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Matn3O35701 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Matn3O35701 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Matn3O35701 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Matn3O35701 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Matn3O35701 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Matn3O35701 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Matn3O35701 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Matn3O35701 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC14.43□□□□□ -0.1
Matn3O35701 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Matn3O35701 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Matn3O35701 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Matn3O35701 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Matn3O35701 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Matn3O35701 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Matn3O35701 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Matn3O35701 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Matn3O35701 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Matn3O35701 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC14.43□□□□□ -0.1
Matn3O35701 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Matn3O35701 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Matn3O35701 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC14.43□□□□□ -0.1
Matn3O35701 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Matn3O35701 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Matn3O35701 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Matn3O35701 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC14.43□□□□□ -0.1
Matn3O35701 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Matn3O35701 Gm12382-201ENSMUST00000122005 922 ntBASIC14.43□□□□□ -0.1
Matn3O35701 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC14.43□□□□□ -0.1
Matn3O35701 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Matn3O35701 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Matn3O35701 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Matn3O35701 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC14.43□□□□□ -0.1
Matn3O35701 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Matn3O35701 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Matn3O35701 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Matn3O35701 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Matn3O35701 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Matn3O35701 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Matn3O35701 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Matn3O35701 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Matn3O35701 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms