Protein–RNA interactions for Protein: O35206

Col15a1, Collagen alpha-1(XV) chain, mousemouse

Predictions only

Length 1,367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col15a1O35206 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Col15a1O35206 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Col15a1O35206 Gm8318-201ENSMUST00000182954 872 ntBASIC20.2■□□□□ 0.82
Col15a1O35206 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Col15a1O35206 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC20.2■□□□□ 0.82
Col15a1O35206 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Col15a1O35206 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Col15a1O35206 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Col15a1O35206 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Col15a1O35206 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Col15a1O35206 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Col15a1O35206 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Col15a1O35206 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Col15a1O35206 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC20.19■□□□□ 0.82
Col15a1O35206 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Col15a1O35206 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Col15a1O35206 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC20.19■□□□□ 0.82
Col15a1O35206 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Col15a1O35206 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Col15a1O35206 Gm11453-201ENSMUST00000117318 1007 ntBASIC20.19■□□□□ 0.82
Col15a1O35206 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Col15a1O35206 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Col15a1O35206 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Col15a1O35206 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Col15a1O35206 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC20.19■□□□□ 0.82
Col15a1O35206 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Col15a1O35206 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Col15a1O35206 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Col15a1O35206 Fgf17-202ENSMUST00000227123 1336 ntBASIC20.18■□□□□ 0.82
Col15a1O35206 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Col15a1O35206 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Col15a1O35206 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Col15a1O35206 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC20.18■□□□□ 0.82
Col15a1O35206 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Col15a1O35206 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Col15a1O35206 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
Col15a1O35206 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Col15a1O35206 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Col15a1O35206 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Col15a1O35206 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC20.18■□□□□ 0.82
Col15a1O35206 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Col15a1O35206 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC20.18■□□□□ 0.82
Col15a1O35206 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Col15a1O35206 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC20.18■□□□□ 0.82
Col15a1O35206 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Col15a1O35206 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC20.18■□□□□ 0.82
Col15a1O35206 Nudt18-203ENSMUST00000228768 1578 ntBASIC20.18■□□□□ 0.82
Col15a1O35206 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
Col15a1O35206 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Col15a1O35206 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Col15a1O35206 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Col15a1O35206 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Col15a1O35206 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Col15a1O35206 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Col15a1O35206 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Col15a1O35206 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Col15a1O35206 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Col15a1O35206 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Col15a1O35206 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Col15a1O35206 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
Col15a1O35206 Prkcz2-201ENSMUST00000206136 1756 ntBASIC20.17■□□□□ 0.82
Col15a1O35206 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC20.17■□□□□ 0.82
Col15a1O35206 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Col15a1O35206 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
Col15a1O35206 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC20.17■□□□□ 0.82
Col15a1O35206 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Col15a1O35206 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Col15a1O35206 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Col15a1O35206 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Col15a1O35206 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Col15a1O35206 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Col15a1O35206 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Col15a1O35206 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Col15a1O35206 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Col15a1O35206 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Col15a1O35206 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Col15a1O35206 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Col15a1O35206 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Col15a1O35206 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Col15a1O35206 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Col15a1O35206 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Col15a1O35206 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
Col15a1O35206 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Col15a1O35206 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC20.15■□□□□ 0.82
Col15a1O35206 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Col15a1O35206 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Col15a1O35206 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Col15a1O35206 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Col15a1O35206 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Col15a1O35206 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
Col15a1O35206 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Col15a1O35206 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Col15a1O35206 CT025555.1-201ENSMUST00000225901 1217 ntBASIC20.15■□□□□ 0.82
Col15a1O35206 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Col15a1O35206 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Col15a1O35206 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Col15a1O35206 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Col15a1O35206 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Col15a1O35206 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Col15a1O35206 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms