Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Trove2O08848 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trove2O08848 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trove2O08848 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC16.31■□□□□ 0.2
Trove2O08848 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC16.31■□□□□ 0.2
Trove2O08848 Gm20472-201ENSMUST00000174403 1240 ntBASIC16.31■□□□□ 0.2
Trove2O08848 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trove2O08848 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trove2O08848 App-207ENSMUST00000227737 2827 ntBASIC16.31■□□□□ 0.2
Trove2O08848 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trove2O08848 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trove2O08848 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trove2O08848 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
Trove2O08848 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trove2O08848 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trove2O08848 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trove2O08848 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Trove2O08848 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trove2O08848 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trove2O08848 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trove2O08848 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trove2O08848 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trove2O08848 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trove2O08848 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trove2O08848 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC16.3■□□□□ 0.2
Trove2O08848 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC16.3■□□□□ 0.2
Trove2O08848 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trove2O08848 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trove2O08848 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC16.3■□□□□ 0.2
Trove2O08848 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Trove2O08848 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trove2O08848 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trove2O08848 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trove2O08848 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trove2O08848 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trove2O08848 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trove2O08848 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trove2O08848 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trove2O08848 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trove2O08848 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Trove2O08848 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trove2O08848 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trove2O08848 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trove2O08848 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trove2O08848 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trove2O08848 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trove2O08848 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trove2O08848 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trove2O08848 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trove2O08848 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trove2O08848 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trove2O08848 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trove2O08848 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trove2O08848 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trove2O08848 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trove2O08848 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Trove2O08848 Gm42901-201ENSMUST00000197735 3171 ntBASIC16.29■□□□□ 0.2
Trove2O08848 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Trove2O08848 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trove2O08848 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trove2O08848 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC16.29■□□□□ 0.2
Trove2O08848 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Trove2O08848 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trove2O08848 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trove2O08848 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trove2O08848 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trove2O08848 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trove2O08848 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trove2O08848 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Trove2O08848 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trove2O08848 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trove2O08848 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC16.28■□□□□ 0.2
Trove2O08848 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
Trove2O08848 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Trove2O08848 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trove2O08848 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trove2O08848 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC16.28■□□□□ 0.2
Trove2O08848 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC16.28■□□□□ 0.2
Trove2O08848 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trove2O08848 Gm2274-201ENSMUST00000184539 609 ntBASIC16.28■□□□□ 0.2
Trove2O08848 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trove2O08848 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC16.28■□□□□ 0.2
Trove2O08848 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trove2O08848 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trove2O08848 Gm37912-201ENSMUST00000191895 3076 ntBASIC16.28■□□□□ 0.2
Trove2O08848 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trove2O08848 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trove2O08848 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trove2O08848 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Trove2O08848 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trove2O08848 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trove2O08848 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trove2O08848 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trove2O08848 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trove2O08848 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trove2O08848 Gm38042-201ENSMUST00000191614 5208 ntBASIC16.27■□□□□ 0.2
Trove2O08848 Gm45203-201ENSMUST00000206384 1831 ntBASIC16.27■□□□□ 0.2
Trove2O08848 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trove2O08848 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trove2O08848 Gm4217-201ENSMUST00000182243 1002 ntBASIC16.27■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms