Protein–RNA interactions for Protein: O08784

Tcof1, Treacle protein, mousemouse

Known RBP Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcof1O08784 Gm10293-201ENSMUST00000076317 1002 ntBASIC18.52■□□□□ 0.56
Tcof1O08784 Gm6316-201ENSMUST00000082064 1020 ntBASIC18.52■□□□□ 0.56
Tcof1O08784 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Tcof1O08784 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Tcof1O08784 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Tcof1O08784 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Tcof1O08784 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Tcof1O08784 Shroom3-211ENSMUST00000225438 5742 ntBASIC18.52■□□□□ 0.55
Tcof1O08784 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Tcof1O08784 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Tcof1O08784 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC18.52■□□□□ 0.55
Tcof1O08784 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
Tcof1O08784 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Tcof1O08784 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
Tcof1O08784 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Tcof1O08784 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Tcof1O08784 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tcof1O08784 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Tcof1O08784 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Tcof1O08784 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Tcof1O08784 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC18.51■□□□□ 0.55
Tcof1O08784 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Tcof1O08784 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Tcof1O08784 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Tcof1O08784 Gm5712-201ENSMUST00000199748 1043 ntBASIC18.51■□□□□ 0.55
Tcof1O08784 Gm2651-201ENSMUST00000203560 838 ntBASIC18.51■□□□□ 0.55
Tcof1O08784 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC18.51■□□□□ 0.55
Tcof1O08784 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Tcof1O08784 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
Tcof1O08784 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tcof1O08784 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tcof1O08784 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tcof1O08784 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tcof1O08784 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC18.51■□□□□ 0.55
Tcof1O08784 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC18.51■□□□□ 0.55
Tcof1O08784 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tcof1O08784 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tcof1O08784 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
Tcof1O08784 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Tcof1O08784 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tcof1O08784 Gm27525-201ENSMUST00000184465 107 ntBASIC18.5■□□□□ 0.55
Tcof1O08784 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Tcof1O08784 Gm18206-201ENSMUST00000207027 926 ntBASIC18.5■□□□□ 0.55
Tcof1O08784 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tcof1O08784 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC18.5■□□□□ 0.55
Tcof1O08784 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tcof1O08784 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tcof1O08784 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC18.5■□□□□ 0.55
Tcof1O08784 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tcof1O08784 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tcof1O08784 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tcof1O08784 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tcof1O08784 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Tcof1O08784 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tcof1O08784 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tcof1O08784 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tcof1O08784 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tcof1O08784 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tcof1O08784 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Tcof1O08784 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tcof1O08784 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tcof1O08784 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tcof1O08784 Gm10060-201ENSMUST00000212002 111 ntBASIC18.49■□□□□ 0.55
Tcof1O08784 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tcof1O08784 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tcof1O08784 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC18.49■□□□□ 0.55
Tcof1O08784 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Tcof1O08784 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tcof1O08784 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tcof1O08784 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tcof1O08784 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tcof1O08784 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tcof1O08784 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Tcof1O08784 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tcof1O08784 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tcof1O08784 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC18.49■□□□□ 0.55
Tcof1O08784 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tcof1O08784 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tcof1O08784 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tcof1O08784 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC18.49■□□□□ 0.55
Tcof1O08784 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Tcof1O08784 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Tcof1O08784 Mir5131-201ENSMUST00000175426 93 ntBASIC18.49■□□□□ 0.55
Tcof1O08784 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tcof1O08784 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Tcof1O08784 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tcof1O08784 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Tcof1O08784 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Tcof1O08784 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tcof1O08784 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tcof1O08784 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tcof1O08784 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tcof1O08784 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tcof1O08784 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tcof1O08784 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tcof1O08784 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tcof1O08784 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tcof1O08784 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tcof1O08784 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tcof1O08784 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms