Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Shisa8J3QNX5 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Shisa8J3QNX5 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC14.5□□□□□ -0.09
Shisa8J3QNX5 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Shisa8J3QNX5 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Shisa8J3QNX5 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC14.5□□□□□ -0.09
Shisa8J3QNX5 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC14.5□□□□□ -0.09
Shisa8J3QNX5 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC14.5□□□□□ -0.09
Shisa8J3QNX5 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Shisa8J3QNX5 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Shisa8J3QNX5 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Shisa8J3QNX5 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Shisa8J3QNX5 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
Shisa8J3QNX5 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Shisa8J3QNX5 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Shisa8J3QNX5 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Shisa8J3QNX5 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Shisa8J3QNX5 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Shisa8J3QNX5 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Shisa8J3QNX5 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC14.5□□□□□ -0.09
Shisa8J3QNX5 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Shisa8J3QNX5 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Shisa8J3QNX5 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Shisa8J3QNX5 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Shisa8J3QNX5 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Shisa8J3QNX5 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Shisa8J3QNX5 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC14.49□□□□□ -0.09
Shisa8J3QNX5 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Shisa8J3QNX5 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Shisa8J3QNX5 Gm10653-202ENSMUST00000139570 835 ntBASIC14.49□□□□□ -0.09
Shisa8J3QNX5 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC14.49□□□□□ -0.09
Shisa8J3QNX5 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Shisa8J3QNX5 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC14.49□□□□□ -0.09
Shisa8J3QNX5 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC14.49□□□□□ -0.09
Shisa8J3QNX5 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Shisa8J3QNX5 Gm7370-201ENSMUST00000219471 767 ntBASIC14.49□□□□□ -0.09
Shisa8J3QNX5 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Shisa8J3QNX5 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
Shisa8J3QNX5 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC14.49□□□□□ -0.09
Shisa8J3QNX5 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Shisa8J3QNX5 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Shisa8J3QNX5 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
Shisa8J3QNX5 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Shisa8J3QNX5 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Shisa8J3QNX5 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Shisa8J3QNX5 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC14.49□□□□□ -0.09
Shisa8J3QNX5 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Shisa8J3QNX5 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Shisa8J3QNX5 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Shisa8J3QNX5 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC14.48□□□□□ -0.09
Shisa8J3QNX5 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Shisa8J3QNX5 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Shisa8J3QNX5 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Shisa8J3QNX5 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC14.48□□□□□ -0.09
Shisa8J3QNX5 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC14.48□□□□□ -0.09
Shisa8J3QNX5 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Shisa8J3QNX5 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC14.48□□□□□ -0.09
Shisa8J3QNX5 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC14.48□□□□□ -0.09
Shisa8J3QNX5 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC14.48□□□□□ -0.09
Shisa8J3QNX5 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC14.48□□□□□ -0.09
Shisa8J3QNX5 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Shisa8J3QNX5 Arhgef4-208ENSMUST00000211073 171 ntBASIC14.48□□□□□ -0.09
Shisa8J3QNX5 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Shisa8J3QNX5 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC14.48□□□□□ -0.09
Shisa8J3QNX5 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Shisa8J3QNX5 Gm43352-201ENSMUST00000196419 3065 ntBASIC14.48□□□□□ -0.09
Shisa8J3QNX5 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Shisa8J3QNX5 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Shisa8J3QNX5 AC174678.1-201ENSMUST00000228007 2749 ntBASIC14.48□□□□□ -0.09
Shisa8J3QNX5 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Shisa8J3QNX5 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Shisa8J3QNX5 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Shisa8J3QNX5 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Shisa8J3QNX5 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Shisa8J3QNX5 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Shisa8J3QNX5 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Shisa8J3QNX5 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Shisa8J3QNX5 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Shisa8J3QNX5 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Shisa8J3QNX5 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Shisa8J3QNX5 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Shisa8J3QNX5 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC14.47□□□□□ -0.09
Shisa8J3QNX5 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Shisa8J3QNX5 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Shisa8J3QNX5 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Shisa8J3QNX5 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC14.47□□□□□ -0.09
Shisa8J3QNX5 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Shisa8J3QNX5 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Shisa8J3QNX5 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC14.47□□□□□ -0.09
Shisa8J3QNX5 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC14.47□□□□□ -0.09
Shisa8J3QNX5 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Shisa8J3QNX5 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC14.47□□□□□ -0.09
Shisa8J3QNX5 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Shisa8J3QNX5 Gm3272-201ENSMUST00000181181 1229 ntBASIC14.47□□□□□ -0.09
Shisa8J3QNX5 Odf3b-204ENSMUST00000227834 930 ntBASIC14.47□□□□□ -0.09
Shisa8J3QNX5 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Shisa8J3QNX5 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Shisa8J3QNX5 Gm10566-201ENSMUST00000086739 996 ntBASIC14.47□□□□□ -0.09
Shisa8J3QNX5 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Shisa8J3QNX5 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms