Protein–RNA interactions for Protein: G3X9Z4

Pcf11, Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

Predictions only

Length 1,553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11G3X9Z4 AC025913.2-201ENSMUST00000220136 1766 ntBASIC23.83■■□□□ 1.41
Pcf11G3X9Z4 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Pcf11G3X9Z4 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.4
Pcf11G3X9Z4 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC23.83■■□□□ 1.4
Pcf11G3X9Z4 Gm9385-201ENSMUST00000117563 472 ntBASIC23.82■■□□□ 1.4
Pcf11G3X9Z4 Gm13365-201ENSMUST00000121188 973 ntBASIC23.82■■□□□ 1.4
Pcf11G3X9Z4 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC23.82■■□□□ 1.4
Pcf11G3X9Z4 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Pcf11G3X9Z4 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Pcf11G3X9Z4 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Pcf11G3X9Z4 AC130669.1-201ENSMUST00000228537 1672 ntBASIC23.82■■□□□ 1.4
Pcf11G3X9Z4 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Pcf11G3X9Z4 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Pcf11G3X9Z4 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Pcf11G3X9Z4 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Pcf11G3X9Z4 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Pcf11G3X9Z4 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Pcf11G3X9Z4 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC23.82■■□□□ 1.4
Pcf11G3X9Z4 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Pcf11G3X9Z4 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC23.82■■□□□ 1.4
Pcf11G3X9Z4 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC23.82■■□□□ 1.4
Pcf11G3X9Z4 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Pcf11G3X9Z4 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
Pcf11G3X9Z4 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Pcf11G3X9Z4 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Pcf11G3X9Z4 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Pcf11G3X9Z4 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Pcf11G3X9Z4 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Pcf11G3X9Z4 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Pcf11G3X9Z4 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
Pcf11G3X9Z4 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC23.81■■□□□ 1.4
Pcf11G3X9Z4 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Pcf11G3X9Z4 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC23.81■■□□□ 1.4
Pcf11G3X9Z4 Gm43474-201ENSMUST00000196415 774 ntBASIC23.81■■□□□ 1.4
Pcf11G3X9Z4 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC23.81■■□□□ 1.4
Pcf11G3X9Z4 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC23.81■■□□□ 1.4
Pcf11G3X9Z4 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Pcf11G3X9Z4 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Pcf11G3X9Z4 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Pcf11G3X9Z4 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
Pcf11G3X9Z4 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Pcf11G3X9Z4 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC23.8■■□□□ 1.4
Pcf11G3X9Z4 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC23.8■■□□□ 1.4
Pcf11G3X9Z4 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Pcf11G3X9Z4 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC23.8■■□□□ 1.4
Pcf11G3X9Z4 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Pcf11G3X9Z4 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Pcf11G3X9Z4 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
Pcf11G3X9Z4 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Pcf11G3X9Z4 Gm5628-201ENSMUST00000222318 1049 ntBASIC23.8■■□□□ 1.4
Pcf11G3X9Z4 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Pcf11G3X9Z4 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Pcf11G3X9Z4 AC157650.3-201ENSMUST00000225058 1476 ntBASIC23.8■■□□□ 1.4
Pcf11G3X9Z4 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
Pcf11G3X9Z4 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Pcf11G3X9Z4 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Pcf11G3X9Z4 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC23.8■■□□□ 1.4
Pcf11G3X9Z4 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Pcf11G3X9Z4 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Pcf11G3X9Z4 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Pcf11G3X9Z4 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC23.79■■□□□ 1.4
Pcf11G3X9Z4 Mir6956-201ENSMUST00000183598 62 ntBASIC23.79■■□□□ 1.4
Pcf11G3X9Z4 Ntrk2-205ENSMUST00000224402 2284 ntBASIC23.79■■□□□ 1.4
Pcf11G3X9Z4 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Pcf11G3X9Z4 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Pcf11G3X9Z4 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Pcf11G3X9Z4 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Pcf11G3X9Z4 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Pcf11G3X9Z4 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Pcf11G3X9Z4 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
Pcf11G3X9Z4 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Pcf11G3X9Z4 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC23.78■■□□□ 1.4
Pcf11G3X9Z4 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Pcf11G3X9Z4 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Pcf11G3X9Z4 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
Pcf11G3X9Z4 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
Pcf11G3X9Z4 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Pcf11G3X9Z4 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Pcf11G3X9Z4 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Pcf11G3X9Z4 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
Pcf11G3X9Z4 Gm37171-201ENSMUST00000192636 1185 ntBASIC23.78■■□□□ 1.4
Pcf11G3X9Z4 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC23.78■■□□□ 1.4
Pcf11G3X9Z4 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC23.78■■□□□ 1.4
Pcf11G3X9Z4 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
Pcf11G3X9Z4 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC23.77■■□□□ 1.4
Pcf11G3X9Z4 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Pcf11G3X9Z4 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Pcf11G3X9Z4 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC23.77■■□□□ 1.4
Pcf11G3X9Z4 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC23.77■■□□□ 1.4
Pcf11G3X9Z4 Gm25948-201ENSMUST00000175334 112 ntBASIC23.77■■□□□ 1.4
Pcf11G3X9Z4 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Pcf11G3X9Z4 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
Pcf11G3X9Z4 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Pcf11G3X9Z4 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Pcf11G3X9Z4 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC23.76■■□□□ 1.39
Pcf11G3X9Z4 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Pcf11G3X9Z4 CT025626.1-201ENSMUST00000223735 1455 ntBASIC23.76■■□□□ 1.39
Pcf11G3X9Z4 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Pcf11G3X9Z4 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC23.76■■□□□ 1.39
Pcf11G3X9Z4 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms