Protein–RNA interactions for Protein: G3X9F6

Sh3tc1, SH3 domain and tetratricopeptide repeats 1, mousemouse

Predictions only

Length 1,346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3tc1G3X9F6 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sh3tc1G3X9F6 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sh3tc1G3X9F6 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sh3tc1G3X9F6 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Sh3tc1G3X9F6 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sh3tc1G3X9F6 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sh3tc1G3X9F6 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sh3tc1G3X9F6 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Sh3tc1G3X9F6 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Sh3tc1G3X9F6 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Sh3tc1G3X9F6 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Sh3tc1G3X9F6 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Sh3tc1G3X9F6 Gm45612-201ENSMUST00000211320 160 ntBASIC19.11■□□□□ 0.65
Sh3tc1G3X9F6 AC155252.2-201ENSMUST00000226946 680 ntBASIC19.11■□□□□ 0.65
Sh3tc1G3X9F6 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Sh3tc1G3X9F6 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Sh3tc1G3X9F6 Gm6598-201ENSMUST00000202719 2615 ntBASIC19.11■□□□□ 0.65
Sh3tc1G3X9F6 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Sh3tc1G3X9F6 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
Sh3tc1G3X9F6 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Sh3tc1G3X9F6 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Sh3tc1G3X9F6 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
Sh3tc1G3X9F6 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Sh3tc1G3X9F6 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Sh3tc1G3X9F6 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Sh3tc1G3X9F6 Gm14057-201ENSMUST00000120631 482 ntBASIC19.1■□□□□ 0.65
Sh3tc1G3X9F6 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Sh3tc1G3X9F6 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC19.1■□□□□ 0.65
Sh3tc1G3X9F6 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Sh3tc1G3X9F6 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Sh3tc1G3X9F6 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC19.1■□□□□ 0.65
Sh3tc1G3X9F6 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Sh3tc1G3X9F6 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Sh3tc1G3X9F6 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Sh3tc1G3X9F6 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
Sh3tc1G3X9F6 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Sh3tc1G3X9F6 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Sh3tc1G3X9F6 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Sh3tc1G3X9F6 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC19.1■□□□□ 0.65
Sh3tc1G3X9F6 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Sh3tc1G3X9F6 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC19.1■□□□□ 0.65
Sh3tc1G3X9F6 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Sh3tc1G3X9F6 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC19.09■□□□□ 0.65
Sh3tc1G3X9F6 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sh3tc1G3X9F6 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sh3tc1G3X9F6 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Sh3tc1G3X9F6 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sh3tc1G3X9F6 AC119177.1-201ENSMUST00000227647 1332 ntBASIC19.09■□□□□ 0.65
Sh3tc1G3X9F6 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Sh3tc1G3X9F6 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC19.09■□□□□ 0.65
Sh3tc1G3X9F6 Gm12892-201ENSMUST00000117367 1146 ntBASIC19.09■□□□□ 0.65
Sh3tc1G3X9F6 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC19.09■□□□□ 0.65
Sh3tc1G3X9F6 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC19.09■□□□□ 0.65
Sh3tc1G3X9F6 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC19.09■□□□□ 0.65
Sh3tc1G3X9F6 AC158982.1-201ENSMUST00000228377 901 ntBASIC19.09■□□□□ 0.65
Sh3tc1G3X9F6 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
Sh3tc1G3X9F6 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sh3tc1G3X9F6 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sh3tc1G3X9F6 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sh3tc1G3X9F6 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Sh3tc1G3X9F6 Gm43294-201ENSMUST00000202850 2490 ntBASIC19.09■□□□□ 0.65
Sh3tc1G3X9F6 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sh3tc1G3X9F6 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sh3tc1G3X9F6 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC19.09■□□□□ 0.65
Sh3tc1G3X9F6 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sh3tc1G3X9F6 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Sh3tc1G3X9F6 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
Sh3tc1G3X9F6 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Sh3tc1G3X9F6 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Sh3tc1G3X9F6 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
Sh3tc1G3X9F6 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
Sh3tc1G3X9F6 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
Sh3tc1G3X9F6 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC19.08■□□□□ 0.65
Sh3tc1G3X9F6 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
Sh3tc1G3X9F6 Mir6956-201ENSMUST00000183598 62 ntBASIC19.08■□□□□ 0.65
Sh3tc1G3X9F6 Thap2-203ENSMUST00000218989 527 ntBASIC19.08■□□□□ 0.65
Sh3tc1G3X9F6 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Sh3tc1G3X9F6 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Sh3tc1G3X9F6 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Sh3tc1G3X9F6 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
Sh3tc1G3X9F6 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Sh3tc1G3X9F6 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Sh3tc1G3X9F6 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Sh3tc1G3X9F6 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC19.08■□□□□ 0.64
Sh3tc1G3X9F6 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Sh3tc1G3X9F6 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Sh3tc1G3X9F6 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sh3tc1G3X9F6 AC115863.1-201ENSMUST00000214815 1813 ntBASIC19.07■□□□□ 0.64
Sh3tc1G3X9F6 Gm13216-201ENSMUST00000117145 591 ntBASIC19.07■□□□□ 0.64
Sh3tc1G3X9F6 Gm13616-201ENSMUST00000120600 222 ntBASIC19.07■□□□□ 0.64
Sh3tc1G3X9F6 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC19.07■□□□□ 0.64
Sh3tc1G3X9F6 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sh3tc1G3X9F6 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
Sh3tc1G3X9F6 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Sh3tc1G3X9F6 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sh3tc1G3X9F6 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sh3tc1G3X9F6 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Sh3tc1G3X9F6 Nrn1-204ENSMUST00000224323 1779 ntBASIC19.07■□□□□ 0.64
Sh3tc1G3X9F6 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC19.07■□□□□ 0.64
Sh3tc1G3X9F6 Grk6-207ENSMUST00000225925 2769 ntBASIC19.07■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms