Protein–RNA interactions for Protein: F8VQ70

Scaper, S phase cyclin A-associated protein in the ER, mousemouse

Known RBP Predictions only

Length 1,398 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ScaperF8VQ70 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.8
ScaperF8VQ70 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC20.08■□□□□ 0.8
ScaperF8VQ70 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
ScaperF8VQ70 Gm6858-201ENSMUST00000208582 1468 ntBASIC20.08■□□□□ 0.8
ScaperF8VQ70 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
ScaperF8VQ70 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
ScaperF8VQ70 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
ScaperF8VQ70 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC20.08■□□□□ 0.8
ScaperF8VQ70 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
ScaperF8VQ70 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC20.08■□□□□ 0.8
ScaperF8VQ70 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
ScaperF8VQ70 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC20.08■□□□□ 0.8
ScaperF8VQ70 Gm5253-201ENSMUST00000187104 1025 ntBASIC20.08■□□□□ 0.8
ScaperF8VQ70 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC20.08■□□□□ 0.8
ScaperF8VQ70 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC20.08■□□□□ 0.8
ScaperF8VQ70 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
ScaperF8VQ70 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
ScaperF8VQ70 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
ScaperF8VQ70 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
ScaperF8VQ70 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ScaperF8VQ70 Hivep3-201ENSMUST00000084306 2973 ntBASIC20.07■□□□□ 0.8
ScaperF8VQ70 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ScaperF8VQ70 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
ScaperF8VQ70 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
ScaperF8VQ70 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
ScaperF8VQ70 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
ScaperF8VQ70 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
ScaperF8VQ70 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ScaperF8VQ70 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC20.07■□□□□ 0.8
ScaperF8VQ70 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
ScaperF8VQ70 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ScaperF8VQ70 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ScaperF8VQ70 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ScaperF8VQ70 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ScaperF8VQ70 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ScaperF8VQ70 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
ScaperF8VQ70 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ScaperF8VQ70 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ScaperF8VQ70 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
ScaperF8VQ70 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ScaperF8VQ70 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ScaperF8VQ70 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ScaperF8VQ70 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ScaperF8VQ70 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ScaperF8VQ70 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC20.06■□□□□ 0.8
ScaperF8VQ70 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
ScaperF8VQ70 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
ScaperF8VQ70 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ScaperF8VQ70 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ScaperF8VQ70 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ScaperF8VQ70 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
ScaperF8VQ70 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
ScaperF8VQ70 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
ScaperF8VQ70 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC20.05■□□□□ 0.8
ScaperF8VQ70 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ScaperF8VQ70 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ScaperF8VQ70 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
ScaperF8VQ70 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
ScaperF8VQ70 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ScaperF8VQ70 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC20.05■□□□□ 0.8
ScaperF8VQ70 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
ScaperF8VQ70 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC20.05■□□□□ 0.8
ScaperF8VQ70 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC20.05■□□□□ 0.8
ScaperF8VQ70 Gm11764-201ENSMUST00000120221 623 ntBASIC20.05■□□□□ 0.8
ScaperF8VQ70 Gm25406-201ENSMUST00000157599 105 ntBASIC20.05■□□□□ 0.8
ScaperF8VQ70 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ScaperF8VQ70 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC20.05■□□□□ 0.8
ScaperF8VQ70 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
ScaperF8VQ70 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
ScaperF8VQ70 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
ScaperF8VQ70 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ScaperF8VQ70 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
ScaperF8VQ70 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ScaperF8VQ70 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
ScaperF8VQ70 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
ScaperF8VQ70 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ScaperF8VQ70 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ScaperF8VQ70 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC20.04■□□□□ 0.8
ScaperF8VQ70 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
ScaperF8VQ70 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
ScaperF8VQ70 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ScaperF8VQ70 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ScaperF8VQ70 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC20.04■□□□□ 0.8
ScaperF8VQ70 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ScaperF8VQ70 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
ScaperF8VQ70 Gm44945-201ENSMUST00000206764 1187 ntBASIC20.04■□□□□ 0.8
ScaperF8VQ70 Gm7229-201ENSMUST00000214719 1007 ntBASIC20.04■□□□□ 0.8
ScaperF8VQ70 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ScaperF8VQ70 Gm8396-201ENSMUST00000057361 823 ntBASIC20.04■□□□□ 0.8
ScaperF8VQ70 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC20.04■□□□□ 0.8
ScaperF8VQ70 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
ScaperF8VQ70 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ScaperF8VQ70 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ScaperF8VQ70 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ScaperF8VQ70 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ScaperF8VQ70 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ScaperF8VQ70 Gm9867-201ENSMUST00000192212 2647 ntBASIC20.03■□□□□ 0.8
ScaperF8VQ70 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ScaperF8VQ70 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
ScaperF8VQ70 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms