Protein–RNA interactions for Protein: F8VPY8

Colca2, COLCA2 homolog, mousemouse

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Colca2F8VPY8 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Colca2F8VPY8 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Colca2F8VPY8 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Colca2F8VPY8 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Colca2F8VPY8 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Colca2F8VPY8 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Colca2F8VPY8 Grk6-207ENSMUST00000225925 2769 ntBASIC14.97□□□□□ -0.01
Colca2F8VPY8 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Colca2F8VPY8 Gm36858-201ENSMUST00000194501 2391 ntBASIC14.97□□□□□ -0.01
Colca2F8VPY8 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Colca2F8VPY8 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Colca2F8VPY8 Gm15693-201ENSMUST00000120470 637 ntBASIC14.97□□□□□ -0.01
Colca2F8VPY8 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Colca2F8VPY8 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Colca2F8VPY8 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Colca2F8VPY8 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC14.97□□□□□ -0.01
Colca2F8VPY8 CT030684.1-201ENSMUST00000227292 914 ntBASIC14.97□□□□□ -0.01
Colca2F8VPY8 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Colca2F8VPY8 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Colca2F8VPY8 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Colca2F8VPY8 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Colca2F8VPY8 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC14.97□□□□□ -0.01
Colca2F8VPY8 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Colca2F8VPY8 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Colca2F8VPY8 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Colca2F8VPY8 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Colca2F8VPY8 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Colca2F8VPY8 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Colca2F8VPY8 Gm43182-201ENSMUST00000199476 2528 ntBASIC14.96□□□□□ -0.01
Colca2F8VPY8 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Colca2F8VPY8 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC14.96□□□□□ -0.01
Colca2F8VPY8 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Colca2F8VPY8 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Colca2F8VPY8 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Colca2F8VPY8 Gm5866-201ENSMUST00000177881 973 ntBASIC14.96□□□□□ -0.01
Colca2F8VPY8 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC14.96□□□□□ -0.01
Colca2F8VPY8 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC14.96□□□□□ -0.01
Colca2F8VPY8 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC14.96□□□□□ -0.01
Colca2F8VPY8 Gm5779-201ENSMUST00000218467 910 ntBASIC14.96□□□□□ -0.01
Colca2F8VPY8 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Colca2F8VPY8 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Colca2F8VPY8 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Colca2F8VPY8 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Colca2F8VPY8 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Colca2F8VPY8 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Colca2F8VPY8 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Colca2F8VPY8 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Colca2F8VPY8 Haglr-201ENSMUST00000100000 2085 ntBASIC14.96□□□□□ -0.02
Colca2F8VPY8 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Colca2F8VPY8 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Colca2F8VPY8 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC14.95□□□□□ -0.02
Colca2F8VPY8 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC14.95□□□□□ -0.02
Colca2F8VPY8 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Colca2F8VPY8 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC14.95□□□□□ -0.02
Colca2F8VPY8 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Colca2F8VPY8 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Colca2F8VPY8 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Colca2F8VPY8 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Colca2F8VPY8 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Colca2F8VPY8 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Colca2F8VPY8 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Colca2F8VPY8 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Colca2F8VPY8 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC14.95□□□□□ -0.02
Colca2F8VPY8 Gm27306-201ENSMUST00000183970 107 ntBASIC14.95□□□□□ -0.02
Colca2F8VPY8 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC14.95□□□□□ -0.02
Colca2F8VPY8 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC14.95□□□□□ -0.02
Colca2F8VPY8 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC14.95□□□□□ -0.02
Colca2F8VPY8 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Colca2F8VPY8 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Colca2F8VPY8 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Colca2F8VPY8 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Colca2F8VPY8 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Colca2F8VPY8 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Colca2F8VPY8 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Colca2F8VPY8 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Colca2F8VPY8 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Colca2F8VPY8 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Colca2F8VPY8 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Colca2F8VPY8 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Colca2F8VPY8 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Colca2F8VPY8 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Colca2F8VPY8 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Colca2F8VPY8 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Colca2F8VPY8 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC14.94□□□□□ -0.02
Colca2F8VPY8 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC14.94□□□□□ -0.02
Colca2F8VPY8 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Colca2F8VPY8 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Colca2F8VPY8 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Colca2F8VPY8 Gm11424-201ENSMUST00000121929 829 ntBASIC14.94□□□□□ -0.02
Colca2F8VPY8 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC14.94□□□□□ -0.02
Colca2F8VPY8 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Colca2F8VPY8 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Colca2F8VPY8 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC14.94□□□□□ -0.02
Colca2F8VPY8 Gm10154-201ENSMUST00000084445 354 ntBASIC14.94□□□□□ -0.02
Colca2F8VPY8 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Colca2F8VPY8 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Colca2F8VPY8 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC14.94□□□□□ -0.02
Colca2F8VPY8 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Colca2F8VPY8 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC14.94□□□□□ -0.02
Colca2F8VPY8 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms