Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh1F7BJK1 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC14.31□□□□□ -0.12
Pcdh1F7BJK1 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh1F7BJK1 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh1F7BJK1 Gm7213-201ENSMUST00000215977 950 ntBASIC14.31□□□□□ -0.12
Pcdh1F7BJK1 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC14.31□□□□□ -0.12
Pcdh1F7BJK1 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh1F7BJK1 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh1F7BJK1 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh1F7BJK1 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh1F7BJK1 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh1F7BJK1 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh1F7BJK1 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh1F7BJK1 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh1F7BJK1 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh1F7BJK1 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh1F7BJK1 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh1F7BJK1 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC14.31□□□□□ -0.12
Pcdh1F7BJK1 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh1F7BJK1 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC14.31□□□□□ -0.12
Pcdh1F7BJK1 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh1F7BJK1 Gm6858-201ENSMUST00000208582 1468 ntBASIC14.31□□□□□ -0.12
Pcdh1F7BJK1 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh1F7BJK1 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh1F7BJK1 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh1F7BJK1 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdh1F7BJK1 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC14.3□□□□□ -0.12
Pcdh1F7BJK1 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdh1F7BJK1 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdh1F7BJK1 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdh1F7BJK1 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdh1F7BJK1 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Pcdh1F7BJK1 Gm13474-201ENSMUST00000122466 815 ntBASIC14.3□□□□□ -0.12
Pcdh1F7BJK1 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Pcdh1F7BJK1 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdh1F7BJK1 Gm30025-201ENSMUST00000218555 728 ntBASIC14.3□□□□□ -0.12
Pcdh1F7BJK1 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdh1F7BJK1 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdh1F7BJK1 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdh1F7BJK1 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdh1F7BJK1 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdh1F7BJK1 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC14.3□□□□□ -0.12
Pcdh1F7BJK1 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdh1F7BJK1 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdh1F7BJK1 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdh1F7BJK1 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Pcdh1F7BJK1 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC14.3□□□□□ -0.12
Pcdh1F7BJK1 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC14.3□□□□□ -0.12
Pcdh1F7BJK1 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
Pcdh1F7BJK1 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC14.3□□□□□ -0.12
Pcdh1F7BJK1 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdh1F7BJK1 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdh1F7BJK1 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdh1F7BJK1 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdh1F7BJK1 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdh1F7BJK1 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Pcdh1F7BJK1 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh1F7BJK1 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh1F7BJK1 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh1F7BJK1 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh1F7BJK1 Tfap2a-203ENSMUST00000223869 2037 ntBASIC14.29□□□□□ -0.12
Pcdh1F7BJK1 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh1F7BJK1 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh1F7BJK1 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh1F7BJK1 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC14.29□□□□□ -0.12
Pcdh1F7BJK1 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC14.29□□□□□ -0.12
Pcdh1F7BJK1 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh1F7BJK1 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC14.29□□□□□ -0.12
Pcdh1F7BJK1 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh1F7BJK1 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh1F7BJK1 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh1F7BJK1 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh1F7BJK1 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Pcdh1F7BJK1 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh1F7BJK1 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh1F7BJK1 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh1F7BJK1 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Pcdh1F7BJK1 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh1F7BJK1 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
Pcdh1F7BJK1 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Pcdh1F7BJK1 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh1F7BJK1 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh1F7BJK1 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh1F7BJK1 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh1F7BJK1 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
Pcdh1F7BJK1 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh1F7BJK1 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh1F7BJK1 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh1F7BJK1 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh1F7BJK1 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Pcdh1F7BJK1 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh1F7BJK1 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh1F7BJK1 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh1F7BJK1 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh1F7BJK1 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh1F7BJK1 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
Pcdh1F7BJK1 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh1F7BJK1 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Pcdh1F7BJK1 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh1F7BJK1 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms