Protein–RNA interactions for Protein: F6V035

Ccdc149, Coiled-coil domain-containing 149, mousemouse

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc149F6V035 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ccdc149F6V035 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ccdc149F6V035 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ccdc149F6V035 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ccdc149F6V035 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Ccdc149F6V035 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC16.07■□□□□ 0.16
Ccdc149F6V035 Gm9727-201ENSMUST00000161387 555 ntBASIC16.07■□□□□ 0.16
Ccdc149F6V035 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC16.07■□□□□ 0.16
Ccdc149F6V035 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC16.07■□□□□ 0.16
Ccdc149F6V035 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC16.07■□□□□ 0.16
Ccdc149F6V035 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ccdc149F6V035 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC16.07■□□□□ 0.16
Ccdc149F6V035 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ccdc149F6V035 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ccdc149F6V035 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC16.07■□□□□ 0.16
Ccdc149F6V035 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Ccdc149F6V035 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ccdc149F6V035 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ccdc149F6V035 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Ccdc149F6V035 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ccdc149F6V035 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ccdc149F6V035 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ccdc149F6V035 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ccdc149F6V035 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Ccdc149F6V035 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ccdc149F6V035 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ccdc149F6V035 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ccdc149F6V035 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ccdc149F6V035 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ccdc149F6V035 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ccdc149F6V035 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ccdc149F6V035 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ccdc149F6V035 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC16.06■□□□□ 0.16
Ccdc149F6V035 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC16.06■□□□□ 0.16
Ccdc149F6V035 Gm2308-201ENSMUST00000166539 1004 ntBASIC16.06■□□□□ 0.16
Ccdc149F6V035 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Ccdc149F6V035 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC16.06■□□□□ 0.16
Ccdc149F6V035 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC16.06■□□□□ 0.16
Ccdc149F6V035 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Ccdc149F6V035 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Ccdc149F6V035 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Ccdc149F6V035 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ccdc149F6V035 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ccdc149F6V035 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ccdc149F6V035 Gm45412-201ENSMUST00000210217 2275 ntBASIC16.06■□□□□ 0.16
Ccdc149F6V035 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ccdc149F6V035 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ccdc149F6V035 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ccdc149F6V035 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ccdc149F6V035 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
Ccdc149F6V035 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ccdc149F6V035 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ccdc149F6V035 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ccdc149F6V035 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC16.05■□□□□ 0.16
Ccdc149F6V035 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Ccdc149F6V035 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ccdc149F6V035 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ccdc149F6V035 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ccdc149F6V035 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC16.05■□□□□ 0.16
Ccdc149F6V035 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
Ccdc149F6V035 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ccdc149F6V035 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC16.05■□□□□ 0.16
Ccdc149F6V035 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC16.05■□□□□ 0.16
Ccdc149F6V035 Gm45683-201ENSMUST00000210825 1247 ntBASIC16.05■□□□□ 0.16
Ccdc149F6V035 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ccdc149F6V035 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ccdc149F6V035 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ccdc149F6V035 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Ccdc149F6V035 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ccdc149F6V035 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Ccdc149F6V035 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ccdc149F6V035 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Ccdc149F6V035 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc149F6V035 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC16.04■□□□□ 0.16
Ccdc149F6V035 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc149F6V035 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc149F6V035 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Ccdc149F6V035 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc149F6V035 Gm15358-201ENSMUST00000119249 520 ntBASIC16.04■□□□□ 0.16
Ccdc149F6V035 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc149F6V035 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC16.04■□□□□ 0.16
Ccdc149F6V035 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc149F6V035 Gm37153-201ENSMUST00000193637 231 ntBASIC16.04■□□□□ 0.16
Ccdc149F6V035 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc149F6V035 Gm19164-201ENSMUST00000210667 640 ntBASIC16.04■□□□□ 0.16
Ccdc149F6V035 AC093926.2-201ENSMUST00000214468 1228 ntBASIC16.04■□□□□ 0.16
Ccdc149F6V035 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc149F6V035 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
Ccdc149F6V035 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC16.04■□□□□ 0.16
Ccdc149F6V035 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Ccdc149F6V035 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Ccdc149F6V035 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC16.04■□□□□ 0.16
Ccdc149F6V035 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC16.04■□□□□ 0.16
Ccdc149F6V035 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc149F6V035 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Ccdc149F6V035 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc149F6V035 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc149F6V035 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc149F6V035 AC131586.3-201ENSMUST00000228355 1367 ntBASIC16.03■□□□□ 0.16
Ccdc149F6V035 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms