Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdh17E9PXF0 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdh17E9PXF0 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdh17E9PXF0 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdh17E9PXF0 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdh17E9PXF0 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC14.73□□□□□ -0.05
Pcdh17E9PXF0 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdh17E9PXF0 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Pcdh17E9PXF0 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdh17E9PXF0 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdh17E9PXF0 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdh17E9PXF0 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdh17E9PXF0 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdh17E9PXF0 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdh17E9PXF0 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdh17E9PXF0 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Pcdh17E9PXF0 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdh17E9PXF0 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC14.73□□□□□ -0.05
Pcdh17E9PXF0 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdh17E9PXF0 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC14.73□□□□□ -0.05
Pcdh17E9PXF0 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC14.73□□□□□ -0.05
Pcdh17E9PXF0 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC14.73□□□□□ -0.05
Pcdh17E9PXF0 Gm8655-201ENSMUST00000221159 852 ntBASIC14.73□□□□□ -0.05
Pcdh17E9PXF0 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdh17E9PXF0 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdh17E9PXF0 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdh17E9PXF0 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdh17E9PXF0 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdh17E9PXF0 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdh17E9PXF0 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdh17E9PXF0 AC132265.1-201ENSMUST00000219233 1665 ntBASIC14.73□□□□□ -0.05
Pcdh17E9PXF0 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdh17E9PXF0 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdh17E9PXF0 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdh17E9PXF0 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdh17E9PXF0 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdh17E9PXF0 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdh17E9PXF0 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdh17E9PXF0 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdh17E9PXF0 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdh17E9PXF0 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdh17E9PXF0 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdh17E9PXF0 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdh17E9PXF0 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
Pcdh17E9PXF0 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdh17E9PXF0 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
Pcdh17E9PXF0 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Pcdh17E9PXF0 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdh17E9PXF0 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdh17E9PXF0 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC14.72□□□□□ -0.05
Pcdh17E9PXF0 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdh17E9PXF0 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdh17E9PXF0 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdh17E9PXF0 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdh17E9PXF0 Gm15173-201ENSMUST00000122049 433 ntBASIC14.72□□□□□ -0.05
Pcdh17E9PXF0 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC14.72□□□□□ -0.05
Pcdh17E9PXF0 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC14.72□□□□□ -0.05
Pcdh17E9PXF0 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdh17E9PXF0 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdh17E9PXF0 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC14.72□□□□□ -0.05
Pcdh17E9PXF0 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC14.72□□□□□ -0.05
Pcdh17E9PXF0 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdh17E9PXF0 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC14.72□□□□□ -0.05
Pcdh17E9PXF0 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdh17E9PXF0 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdh17E9PXF0 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Pcdh17E9PXF0 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdh17E9PXF0 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdh17E9PXF0 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
Pcdh17E9PXF0 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Pcdh17E9PXF0 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdh17E9PXF0 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdh17E9PXF0 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdh17E9PXF0 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdh17E9PXF0 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdh17E9PXF0 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdh17E9PXF0 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdh17E9PXF0 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Pcdh17E9PXF0 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC14.72□□□□□ -0.05
Pcdh17E9PXF0 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdh17E9PXF0 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdh17E9PXF0 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdh17E9PXF0 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC14.71□□□□□ -0.05
Pcdh17E9PXF0 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdh17E9PXF0 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdh17E9PXF0 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdh17E9PXF0 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Pcdh17E9PXF0 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdh17E9PXF0 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdh17E9PXF0 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdh17E9PXF0 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdh17E9PXF0 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC14.71□□□□□ -0.05
Pcdh17E9PXF0 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Pcdh17E9PXF0 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdh17E9PXF0 Gm11780-201ENSMUST00000136880 516 ntBASIC14.71□□□□□ -0.05
Pcdh17E9PXF0 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC14.71□□□□□ -0.05
Pcdh17E9PXF0 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdh17E9PXF0 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC14.71□□□□□ -0.05
Pcdh17E9PXF0 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC14.71□□□□□ -0.05
Pcdh17E9PXF0 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms