Protein–RNA interactions for Protein: D3Z4R4

Nkx6-2, NK6 homeobox 2, mousemouse

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-2D3Z4R4 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Nkx6-2D3Z4R4 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nkx6-2D3Z4R4 CT030684.3-201ENSMUST00000227308 2445 ntBASIC12.96□□□□□ -0.33
Nkx6-2D3Z4R4 Gm37820-201ENSMUST00000194021 2147 ntBASIC12.96□□□□□ -0.33
Nkx6-2D3Z4R4 Gm9988-201ENSMUST00000069786 435 ntBASIC12.96□□□□□ -0.33
Nkx6-2D3Z4R4 AC131586.2-201ENSMUST00000228370 1512 ntBASIC12.96□□□□□ -0.33
Nkx6-2D3Z4R4 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Nkx6-2D3Z4R4 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nkx6-2D3Z4R4 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nkx6-2D3Z4R4 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.34
Nkx6-2D3Z4R4 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nkx6-2D3Z4R4 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nkx6-2D3Z4R4 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nkx6-2D3Z4R4 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nkx6-2D3Z4R4 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC12.96□□□□□ -0.34
Nkx6-2D3Z4R4 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nkx6-2D3Z4R4 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nkx6-2D3Z4R4 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Nkx6-2D3Z4R4 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nkx6-2D3Z4R4 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx6-2D3Z4R4 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Nkx6-2D3Z4R4 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Nkx6-2D3Z4R4 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx6-2D3Z4R4 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC12.95□□□□□ -0.34
Nkx6-2D3Z4R4 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx6-2D3Z4R4 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx6-2D3Z4R4 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx6-2D3Z4R4 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx6-2D3Z4R4 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC12.95□□□□□ -0.34
Nkx6-2D3Z4R4 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx6-2D3Z4R4 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx6-2D3Z4R4 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx6-2D3Z4R4 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC12.95□□□□□ -0.34
Nkx6-2D3Z4R4 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC12.95□□□□□ -0.34
Nkx6-2D3Z4R4 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx6-2D3Z4R4 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx6-2D3Z4R4 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx6-2D3Z4R4 Ap5m1-205ENSMUST00000227431 3757 ntBASIC12.95□□□□□ -0.34
Nkx6-2D3Z4R4 Ntrk2-209ENSMUST00000225950 2640 ntBASIC12.95□□□□□ -0.34
Nkx6-2D3Z4R4 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx6-2D3Z4R4 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC12.95□□□□□ -0.34
Nkx6-2D3Z4R4 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx6-2D3Z4R4 Gm38391-201ENSMUST00000191720 4069 ntBASIC12.95□□□□□ -0.34
Nkx6-2D3Z4R4 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx6-2D3Z4R4 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC12.95□□□□□ -0.34
Nkx6-2D3Z4R4 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx6-2D3Z4R4 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx6-2D3Z4R4 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx6-2D3Z4R4 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx6-2D3Z4R4 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx6-2D3Z4R4 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx6-2D3Z4R4 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx6-2D3Z4R4 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC12.94□□□□□ -0.34
Nkx6-2D3Z4R4 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx6-2D3Z4R4 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx6-2D3Z4R4 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Nkx6-2D3Z4R4 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx6-2D3Z4R4 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx6-2D3Z4R4 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx6-2D3Z4R4 AL590614.2-201ENSMUST00000225374 1937 ntBASIC12.94□□□□□ -0.34
Nkx6-2D3Z4R4 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx6-2D3Z4R4 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Nkx6-2D3Z4R4 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx6-2D3Z4R4 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx6-2D3Z4R4 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx6-2D3Z4R4 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC12.94□□□□□ -0.34
Nkx6-2D3Z4R4 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx6-2D3Z4R4 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Nkx6-2D3Z4R4 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx6-2D3Z4R4 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Nkx6-2D3Z4R4 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx6-2D3Z4R4 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Nkx6-2D3Z4R4 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx6-2D3Z4R4 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx6-2D3Z4R4 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx6-2D3Z4R4 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Nkx6-2D3Z4R4 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Nkx6-2D3Z4R4 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx6-2D3Z4R4 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Nkx6-2D3Z4R4 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Nkx6-2D3Z4R4 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC12.94□□□□□ -0.34
Nkx6-2D3Z4R4 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx6-2D3Z4R4 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx6-2D3Z4R4 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx6-2D3Z4R4 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx6-2D3Z4R4 Gm21451-201ENSMUST00000111062 2775 ntBASIC12.93□□□□□ -0.34
Nkx6-2D3Z4R4 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx6-2D3Z4R4 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Nkx6-2D3Z4R4 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx6-2D3Z4R4 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx6-2D3Z4R4 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx6-2D3Z4R4 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx6-2D3Z4R4 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx6-2D3Z4R4 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx6-2D3Z4R4 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx6-2D3Z4R4 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC12.93□□□□□ -0.34
Nkx6-2D3Z4R4 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC12.93□□□□□ -0.34
Nkx6-2D3Z4R4 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC12.93□□□□□ -0.34
Nkx6-2D3Z4R4 Gm6139-201ENSMUST00000079261 882 ntBASIC12.93□□□□□ -0.34
Nkx6-2D3Z4R4 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms