Protein–RNA interactions for Protein: D3Z3K2

Ccnb1ip1, E3 ubiquitin-protein ligase CCNB1IP1, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccnb1ip1D3Z3K2 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccnb1ip1D3Z3K2 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccnb1ip1D3Z3K2 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccnb1ip1D3Z3K2 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccnb1ip1D3Z3K2 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccnb1ip1D3Z3K2 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Ccnb1ip1D3Z3K2 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccnb1ip1D3Z3K2 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Ccnb1ip1D3Z3K2 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccnb1ip1D3Z3K2 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ccnb1ip1D3Z3K2 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccnb1ip1D3Z3K2 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccnb1ip1D3Z3K2 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ccnb1ip1D3Z3K2 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccnb1ip1D3Z3K2 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ccnb1ip1D3Z3K2 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Ccnb1ip1D3Z3K2 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Ccnb1ip1D3Z3K2 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccnb1ip1D3Z3K2 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccnb1ip1D3Z3K2 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccnb1ip1D3Z3K2 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccnb1ip1D3Z3K2 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccnb1ip1D3Z3K2 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccnb1ip1D3Z3K2 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccnb1ip1D3Z3K2 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Ccnb1ip1D3Z3K2 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccnb1ip1D3Z3K2 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccnb1ip1D3Z3K2 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccnb1ip1D3Z3K2 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
Ccnb1ip1D3Z3K2 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccnb1ip1D3Z3K2 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC14.39□□□□□ -0.11
Ccnb1ip1D3Z3K2 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ccnb1ip1D3Z3K2 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccnb1ip1D3Z3K2 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC14.39□□□□□ -0.11
Ccnb1ip1D3Z3K2 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccnb1ip1D3Z3K2 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Ccnb1ip1D3Z3K2 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccnb1ip1D3Z3K2 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ccnb1ip1D3Z3K2 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ccnb1ip1D3Z3K2 Gfra2-202ENSMUST00000227633 1480 ntBASIC14.38□□□□□ -0.11
Ccnb1ip1D3Z3K2 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Ccnb1ip1D3Z3K2 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccnb1ip1D3Z3K2 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccnb1ip1D3Z3K2 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccnb1ip1D3Z3K2 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC14.38□□□□□ -0.11
Ccnb1ip1D3Z3K2 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccnb1ip1D3Z3K2 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ccnb1ip1D3Z3K2 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccnb1ip1D3Z3K2 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC14.38□□□□□ -0.11
Ccnb1ip1D3Z3K2 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccnb1ip1D3Z3K2 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccnb1ip1D3Z3K2 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccnb1ip1D3Z3K2 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccnb1ip1D3Z3K2 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC14.38□□□□□ -0.11
Ccnb1ip1D3Z3K2 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccnb1ip1D3Z3K2 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccnb1ip1D3Z3K2 Gm6365-201ENSMUST00000054711 744 ntBASIC14.38□□□□□ -0.11
Ccnb1ip1D3Z3K2 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Ccnb1ip1D3Z3K2 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.38□□□□□ -0.11
Ccnb1ip1D3Z3K2 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC14.38□□□□□ -0.11
Ccnb1ip1D3Z3K2 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccnb1ip1D3Z3K2 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccnb1ip1D3Z3K2 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccnb1ip1D3Z3K2 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccnb1ip1D3Z3K2 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccnb1ip1D3Z3K2 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccnb1ip1D3Z3K2 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccnb1ip1D3Z3K2 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Ccnb1ip1D3Z3K2 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccnb1ip1D3Z3K2 AC167013.2-201ENSMUST00000228520 2684 ntBASIC14.38□□□□□ -0.11
Ccnb1ip1D3Z3K2 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC14.37□□□□□ -0.11
Ccnb1ip1D3Z3K2 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccnb1ip1D3Z3K2 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccnb1ip1D3Z3K2 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Ccnb1ip1D3Z3K2 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ccnb1ip1D3Z3K2 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccnb1ip1D3Z3K2 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccnb1ip1D3Z3K2 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccnb1ip1D3Z3K2 Gm5357-201ENSMUST00000212720 1924 ntBASIC14.37□□□□□ -0.11
Ccnb1ip1D3Z3K2 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccnb1ip1D3Z3K2 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ccnb1ip1D3Z3K2 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccnb1ip1D3Z3K2 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ccnb1ip1D3Z3K2 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC14.37□□□□□ -0.11
Ccnb1ip1D3Z3K2 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC14.37□□□□□ -0.11
Ccnb1ip1D3Z3K2 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccnb1ip1D3Z3K2 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccnb1ip1D3Z3K2 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ccnb1ip1D3Z3K2 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccnb1ip1D3Z3K2 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC14.37□□□□□ -0.11
Ccnb1ip1D3Z3K2 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccnb1ip1D3Z3K2 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccnb1ip1D3Z3K2 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccnb1ip1D3Z3K2 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC14.37□□□□□ -0.11
Ccnb1ip1D3Z3K2 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccnb1ip1D3Z3K2 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ccnb1ip1D3Z3K2 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccnb1ip1D3Z3K2 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccnb1ip1D3Z3K2 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC14.36□□□□□ -0.11
Ccnb1ip1D3Z3K2 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms