Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col6a5A6H584 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col6a5A6H584 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col6a5A6H584 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col6a5A6H584 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC11.9□□□□□ -0.5
Col6a5A6H584 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Col6a5A6H584 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Col6a5A6H584 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col6a5A6H584 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col6a5A6H584 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC11.9□□□□□ -0.5
Col6a5A6H584 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Col6a5A6H584 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col6a5A6H584 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col6a5A6H584 Gm45668-201ENSMUST00000211271 493 ntBASIC11.9□□□□□ -0.5
Col6a5A6H584 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC11.9□□□□□ -0.5
Col6a5A6H584 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Col6a5A6H584 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC11.9□□□□□ -0.5
Col6a5A6H584 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col6a5A6H584 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Col6a5A6H584 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col6a5A6H584 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col6a5A6H584 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Col6a5A6H584 Tfap2a-209ENSMUST00000225180 1828 ntBASIC11.9□□□□□ -0.5
Col6a5A6H584 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Col6a5A6H584 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col6a5A6H584 Gm29361-201ENSMUST00000183323 2000 ntBASIC11.9□□□□□ -0.51
Col6a5A6H584 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Col6a5A6H584 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Col6a5A6H584 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Col6a5A6H584 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Col6a5A6H584 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Col6a5A6H584 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Col6a5A6H584 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Col6a5A6H584 Gm13015-201ENSMUST00000118674 204 ntBASIC11.9□□□□□ -0.51
Col6a5A6H584 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Col6a5A6H584 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Col6a5A6H584 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col6a5A6H584 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col6a5A6H584 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col6a5A6H584 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Col6a5A6H584 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Col6a5A6H584 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC11.89□□□□□ -0.51
Col6a5A6H584 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col6a5A6H584 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Col6a5A6H584 Gm11918-201ENSMUST00000121660 179 ntBASIC11.89□□□□□ -0.51
Col6a5A6H584 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col6a5A6H584 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC11.89□□□□□ -0.51
Col6a5A6H584 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Col6a5A6H584 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Col6a5A6H584 Gm27838-201ENSMUST00000184829 128 ntBASIC11.89□□□□□ -0.51
Col6a5A6H584 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Col6a5A6H584 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col6a5A6H584 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col6a5A6H584 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
Col6a5A6H584 Gm11620-201ENSMUST00000118770 1845 ntBASIC11.89□□□□□ -0.51
Col6a5A6H584 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC11.89□□□□□ -0.51
Col6a5A6H584 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col6a5A6H584 Gm9115-201ENSMUST00000120192 1348 ntBASIC11.89□□□□□ -0.51
Col6a5A6H584 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Col6a5A6H584 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Col6a5A6H584 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC11.89□□□□□ -0.51
Col6a5A6H584 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Col6a5A6H584 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC11.89□□□□□ -0.51
Col6a5A6H584 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC11.89□□□□□ -0.51
Col6a5A6H584 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC11.89□□□□□ -0.51
Col6a5A6H584 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col6a5A6H584 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Col6a5A6H584 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC11.89□□□□□ -0.51
Col6a5A6H584 Gm10154-201ENSMUST00000084445 354 ntBASIC11.89□□□□□ -0.51
Col6a5A6H584 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC11.89□□□□□ -0.51
Col6a5A6H584 Gm43808-201ENSMUST00000202534 2065 ntBASIC11.88□□□□□ -0.51
Col6a5A6H584 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC11.88□□□□□ -0.51
Col6a5A6H584 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col6a5A6H584 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Col6a5A6H584 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Col6a5A6H584 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col6a5A6H584 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col6a5A6H584 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col6a5A6H584 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC11.88□□□□□ -0.51
Col6a5A6H584 Gm15198-201ENSMUST00000117283 177 ntBASIC11.88□□□□□ -0.51
Col6a5A6H584 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC11.88□□□□□ -0.51
Col6a5A6H584 Gm18049-201ENSMUST00000208909 581 ntBASIC11.88□□□□□ -0.51
Col6a5A6H584 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col6a5A6H584 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Col6a5A6H584 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col6a5A6H584 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Col6a5A6H584 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col6a5A6H584 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col6a5A6H584 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col6a5A6H584 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC11.88□□□□□ -0.51
Col6a5A6H584 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col6a5A6H584 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC11.88□□□□□ -0.51
Col6a5A6H584 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC11.88□□□□□ -0.51
Col6a5A6H584 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
Col6a5A6H584 Gm29667-201ENSMUST00000190817 490 ntBASIC11.88□□□□□ -0.51
Col6a5A6H584 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Col6a5A6H584 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC11.88□□□□□ -0.51
Col6a5A6H584 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Col6a5A6H584 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC11.88□□□□□ -0.51
Col6a5A6H584 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms