Protein–RNA interactions for Protein: A0A504

Smim17, MCG116182, isoform CRA_b, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim17A0A504 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smim17A0A504 Rbfox2-206ENSMUST00000227314 1810 ntBASIC14.44□□□□□ -0.1
Smim17A0A504 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smim17A0A504 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
Smim17A0A504 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smim17A0A504 Gm7291-201ENSMUST00000199147 382 ntBASIC14.44□□□□□ -0.1
Smim17A0A504 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC14.44□□□□□ -0.1
Smim17A0A504 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC14.44□□□□□ -0.1
Smim17A0A504 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Smim17A0A504 Gm6365-201ENSMUST00000054711 744 ntBASIC14.44□□□□□ -0.1
Smim17A0A504 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smim17A0A504 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smim17A0A504 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smim17A0A504 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smim17A0A504 Sorbs3-204ENSMUST00000227929 2460 ntBASIC14.44□□□□□ -0.1
Smim17A0A504 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smim17A0A504 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Smim17A0A504 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Smim17A0A504 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smim17A0A504 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC14.44□□□□□ -0.1
Smim17A0A504 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smim17A0A504 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Smim17A0A504 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smim17A0A504 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smim17A0A504 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smim17A0A504 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC14.44□□□□□ -0.1
Smim17A0A504 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smim17A0A504 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smim17A0A504 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Smim17A0A504 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smim17A0A504 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smim17A0A504 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smim17A0A504 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smim17A0A504 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
Smim17A0A504 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
Smim17A0A504 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smim17A0A504 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Smim17A0A504 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC14.43□□□□□ -0.1
Smim17A0A504 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC14.43□□□□□ -0.1
Smim17A0A504 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Smim17A0A504 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smim17A0A504 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC14.43□□□□□ -0.1
Smim17A0A504 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smim17A0A504 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smim17A0A504 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Smim17A0A504 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Smim17A0A504 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smim17A0A504 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Smim17A0A504 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smim17A0A504 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Smim17A0A504 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smim17A0A504 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC14.43□□□□□ -0.1
Smim17A0A504 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smim17A0A504 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smim17A0A504 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smim17A0A504 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Smim17A0A504 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smim17A0A504 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smim17A0A504 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Smim17A0A504 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smim17A0A504 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Smim17A0A504 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Smim17A0A504 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Smim17A0A504 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Smim17A0A504 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC14.42□□□□□ -0.1
Smim17A0A504 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smim17A0A504 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Smim17A0A504 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smim17A0A504 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Smim17A0A504 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC14.42□□□□□ -0.1
Smim17A0A504 Gm5408-201ENSMUST00000197998 747 ntBASIC14.42□□□□□ -0.1
Smim17A0A504 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Smim17A0A504 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smim17A0A504 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC14.42□□□□□ -0.1
Smim17A0A504 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC14.42□□□□□ -0.1
Smim17A0A504 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smim17A0A504 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smim17A0A504 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Smim17A0A504 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC14.42□□□□□ -0.1
Smim17A0A504 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smim17A0A504 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smim17A0A504 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smim17A0A504 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smim17A0A504 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smim17A0A504 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Smim17A0A504 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Smim17A0A504 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smim17A0A504 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smim17A0A504 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smim17A0A504 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Smim17A0A504 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smim17A0A504 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smim17A0A504 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Smim17A0A504 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC14.41□□□□□ -0.1
Smim17A0A504 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smim17A0A504 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smim17A0A504 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Smim17A0A504 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC14.41□□□□□ -0.1
Smim17A0A504 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smim17A0A504 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms