Protein–RNA interactions for Protein: A0A140T8P8

Trbv17, T cell receptor beta, variable 17 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv17A0A140T8P8 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Trbv17A0A140T8P8 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv17A0A140T8P8 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv17A0A140T8P8 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv17A0A140T8P8 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv17A0A140T8P8 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC12.18□□□□□ -0.46
Trbv17A0A140T8P8 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv17A0A140T8P8 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv17A0A140T8P8 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC12.18□□□□□ -0.46
Trbv17A0A140T8P8 AC115863.1-201ENSMUST00000214815 1813 ntBASIC12.18□□□□□ -0.46
Trbv17A0A140T8P8 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC12.18□□□□□ -0.46
Trbv17A0A140T8P8 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC12.18□□□□□ -0.46
Trbv17A0A140T8P8 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Trbv17A0A140T8P8 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv17A0A140T8P8 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv17A0A140T8P8 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv17A0A140T8P8 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC12.17□□□□□ -0.46
Trbv17A0A140T8P8 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv17A0A140T8P8 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv17A0A140T8P8 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv17A0A140T8P8 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv17A0A140T8P8 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv17A0A140T8P8 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv17A0A140T8P8 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv17A0A140T8P8 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv17A0A140T8P8 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv17A0A140T8P8 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
Trbv17A0A140T8P8 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv17A0A140T8P8 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC12.17□□□□□ -0.46
Trbv17A0A140T8P8 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv17A0A140T8P8 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv17A0A140T8P8 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Trbv17A0A140T8P8 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv17A0A140T8P8 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv17A0A140T8P8 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv17A0A140T8P8 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv17A0A140T8P8 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv17A0A140T8P8 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv17A0A140T8P8 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC12.17□□□□□ -0.46
Trbv17A0A140T8P8 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv17A0A140T8P8 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv17A0A140T8P8 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv17A0A140T8P8 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC12.17□□□□□ -0.46
Trbv17A0A140T8P8 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv17A0A140T8P8 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv17A0A140T8P8 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv17A0A140T8P8 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv17A0A140T8P8 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv17A0A140T8P8 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv17A0A140T8P8 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv17A0A140T8P8 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv17A0A140T8P8 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv17A0A140T8P8 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv17A0A140T8P8 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv17A0A140T8P8 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv17A0A140T8P8 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Trbv17A0A140T8P8 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Trbv17A0A140T8P8 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Trbv17A0A140T8P8 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC12.16□□□□□ -0.46
Trbv17A0A140T8P8 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv17A0A140T8P8 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv17A0A140T8P8 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv17A0A140T8P8 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv17A0A140T8P8 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv17A0A140T8P8 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv17A0A140T8P8 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv17A0A140T8P8 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv17A0A140T8P8 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv17A0A140T8P8 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv17A0A140T8P8 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv17A0A140T8P8 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv17A0A140T8P8 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv17A0A140T8P8 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC12.16□□□□□ -0.46
Trbv17A0A140T8P8 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC12.16□□□□□ -0.46
Trbv17A0A140T8P8 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC12.16□□□□□ -0.46
Trbv17A0A140T8P8 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv17A0A140T8P8 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv17A0A140T8P8 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv17A0A140T8P8 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv17A0A140T8P8 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Trbv17A0A140T8P8 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv17A0A140T8P8 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv17A0A140T8P8 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv17A0A140T8P8 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv17A0A140T8P8 Gm38042-201ENSMUST00000191614 5208 ntBASIC12.16□□□□□ -0.46
Trbv17A0A140T8P8 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv17A0A140T8P8 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv17A0A140T8P8 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv17A0A140T8P8 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC12.16□□□□□ -0.46
Trbv17A0A140T8P8 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv17A0A140T8P8 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv17A0A140T8P8 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trbv17A0A140T8P8 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Trbv17A0A140T8P8 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trbv17A0A140T8P8 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trbv17A0A140T8P8 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trbv17A0A140T8P8 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trbv17A0A140T8P8 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Trbv17A0A140T8P8 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trbv17A0A140T8P8 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms