Protein–RNA interactions for Protein: A0A140LIW3

Frmpd3, FERM and PDZ domain-containing 3, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Frmpd3A0A140LIW3 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Frmpd3A0A140LIW3 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC18.71■□□□□ 0.59
Frmpd3A0A140LIW3 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC18.71■□□□□ 0.59
Frmpd3A0A140LIW3 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Frmpd3A0A140LIW3 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Frmpd3A0A140LIW3 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Frmpd3A0A140LIW3 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Frmpd3A0A140LIW3 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Frmpd3A0A140LIW3 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Frmpd3A0A140LIW3 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Frmpd3A0A140LIW3 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.71■□□□□ 0.58
Frmpd3A0A140LIW3 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC18.7■□□□□ 0.58
Frmpd3A0A140LIW3 Gm10499-201ENSMUST00000174094 934 ntBASIC18.7■□□□□ 0.58
Frmpd3A0A140LIW3 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC18.7■□□□□ 0.58
Frmpd3A0A140LIW3 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Frmpd3A0A140LIW3 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Frmpd3A0A140LIW3 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Frmpd3A0A140LIW3 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Frmpd3A0A140LIW3 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC18.7■□□□□ 0.58
Frmpd3A0A140LIW3 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Frmpd3A0A140LIW3 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Frmpd3A0A140LIW3 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Frmpd3A0A140LIW3 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Frmpd3A0A140LIW3 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Frmpd3A0A140LIW3 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC18.7■□□□□ 0.58
Frmpd3A0A140LIW3 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Frmpd3A0A140LIW3 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Frmpd3A0A140LIW3 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Frmpd3A0A140LIW3 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Frmpd3A0A140LIW3 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Frmpd3A0A140LIW3 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Frmpd3A0A140LIW3 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Frmpd3A0A140LIW3 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
Frmpd3A0A140LIW3 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
Frmpd3A0A140LIW3 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC18.69■□□□□ 0.58
Frmpd3A0A140LIW3 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Frmpd3A0A140LIW3 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Frmpd3A0A140LIW3 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC18.69■□□□□ 0.58
Frmpd3A0A140LIW3 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.69■□□□□ 0.58
Frmpd3A0A140LIW3 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC18.69■□□□□ 0.58
Frmpd3A0A140LIW3 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Frmpd3A0A140LIW3 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Frmpd3A0A140LIW3 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Frmpd3A0A140LIW3 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Frmpd3A0A140LIW3 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Frmpd3A0A140LIW3 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Frmpd3A0A140LIW3 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Frmpd3A0A140LIW3 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Frmpd3A0A140LIW3 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Frmpd3A0A140LIW3 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Frmpd3A0A140LIW3 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Frmpd3A0A140LIW3 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Frmpd3A0A140LIW3 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Frmpd3A0A140LIW3 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Frmpd3A0A140LIW3 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Frmpd3A0A140LIW3 Gm16215-201ENSMUST00000161990 637 ntBASIC18.68■□□□□ 0.58
Frmpd3A0A140LIW3 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Frmpd3A0A140LIW3 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Frmpd3A0A140LIW3 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC18.67■□□□□ 0.58
Frmpd3A0A140LIW3 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC18.67■□□□□ 0.58
Frmpd3A0A140LIW3 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Frmpd3A0A140LIW3 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Frmpd3A0A140LIW3 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Frmpd3A0A140LIW3 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.67■□□□□ 0.58
Frmpd3A0A140LIW3 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
Frmpd3A0A140LIW3 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Frmpd3A0A140LIW3 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Frmpd3A0A140LIW3 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC18.67■□□□□ 0.58
Frmpd3A0A140LIW3 Gm7775-201ENSMUST00000218871 853 ntBASIC18.67■□□□□ 0.58
Frmpd3A0A140LIW3 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Frmpd3A0A140LIW3 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC18.67■□□□□ 0.58
Frmpd3A0A140LIW3 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Frmpd3A0A140LIW3 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Frmpd3A0A140LIW3 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Frmpd3A0A140LIW3 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Frmpd3A0A140LIW3 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Frmpd3A0A140LIW3 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Frmpd3A0A140LIW3 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
Frmpd3A0A140LIW3 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Frmpd3A0A140LIW3 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Frmpd3A0A140LIW3 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Frmpd3A0A140LIW3 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Frmpd3A0A140LIW3 Gm6912-201ENSMUST00000117218 544 ntBASIC18.66■□□□□ 0.58
Frmpd3A0A140LIW3 AC135669.1-201ENSMUST00000213585 412 ntBASIC18.66■□□□□ 0.58
Frmpd3A0A140LIW3 Gm6888-201ENSMUST00000221983 706 ntBASIC18.66■□□□□ 0.58
Frmpd3A0A140LIW3 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Frmpd3A0A140LIW3 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Frmpd3A0A140LIW3 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Frmpd3A0A140LIW3 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Frmpd3A0A140LIW3 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC18.66■□□□□ 0.58
Frmpd3A0A140LIW3 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Frmpd3A0A140LIW3 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Frmpd3A0A140LIW3 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
Frmpd3A0A140LIW3 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Frmpd3A0A140LIW3 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Frmpd3A0A140LIW3 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Frmpd3A0A140LIW3 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC18.65■□□□□ 0.58
Frmpd3A0A140LIW3 Gm15487-201ENSMUST00000122373 465 ntBASIC18.65■□□□□ 0.58
Frmpd3A0A140LIW3 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC18.65■□□□□ 0.58
Frmpd3A0A140LIW3 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms