Protein–RNA interactions for Protein: A0A0G2JEU8

Trav13n-1, T cell receptor alpha variable 13N-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-1A0A0G2JEU8 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Gm7935-201ENSMUST00000100555 1278 ntBASIC11.52□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC11.52□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC11.52□□□□□ -0.57
Trav13n-1A0A0G2JEU8 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC11.52□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC11.52□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC11.51□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Gm15442-201ENSMUST00000117905 1527 ntBASIC11.51□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13n-1A0A0G2JEU8 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13n-1A0A0G2JEU8 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC11.51□□□□□ -0.57
Trav13n-1A0A0G2JEU8 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC11.51□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13n-1A0A0G2JEU8 AC153794.1-201ENSMUST00000169148 126 ntBASIC11.51□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC11.51□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC11.51□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC11.51□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Gm43347-201ENSMUST00000200226 580 ntBASIC11.51□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13n-1A0A0G2JEU8 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Trav13n-1A0A0G2JEU8 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC11.51□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC11.51□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC11.5□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13n-1A0A0G2JEU8 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC11.5□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Gm13312-201ENSMUST00000119631 718 ntBASIC11.5□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC11.5□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC11.5□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC11.5□□□□□ -0.57
Trav13n-1A0A0G2JEU8 AC108846.1-201ENSMUST00000214531 513 ntBASIC11.5□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC11.5□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms