Protein–RNA interactions for Protein: A0A0G2JES9

Igkv4-54, Immunoglobulin kappa chain variable 4-54 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv4-54A0A0G2JES9 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Igkv4-54A0A0G2JES9 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Igkv4-54A0A0G2JES9 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Igkv4-54A0A0G2JES9 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC11.35□□□□□ -0.59
Igkv4-54A0A0G2JES9 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC11.34□□□□□ -0.59
Igkv4-54A0A0G2JES9 Gm43548-201ENSMUST00000197139 2353 ntBASIC11.34□□□□□ -0.59
Igkv4-54A0A0G2JES9 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Igkv4-54A0A0G2JES9 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Igkv4-54A0A0G2JES9 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Igkv4-54A0A0G2JES9 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Igkv4-54A0A0G2JES9 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Igkv4-54A0A0G2JES9 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Igkv4-54A0A0G2JES9 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Igkv4-54A0A0G2JES9 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Igkv4-54A0A0G2JES9 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Igkv4-54A0A0G2JES9 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Igkv4-54A0A0G2JES9 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Igkv4-54A0A0G2JES9 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Igkv4-54A0A0G2JES9 Gm13312-201ENSMUST00000119631 718 ntBASIC11.34□□□□□ -0.59
Igkv4-54A0A0G2JES9 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC11.34□□□□□ -0.59
Igkv4-54A0A0G2JES9 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC11.34□□□□□ -0.59
Igkv4-54A0A0G2JES9 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Igkv4-54A0A0G2JES9 AC153794.1-201ENSMUST00000169148 126 ntBASIC11.34□□□□□ -0.59
Igkv4-54A0A0G2JES9 Ank2-226ENSMUST00000189368 339 ntBASIC11.34□□□□□ -0.59
Igkv4-54A0A0G2JES9 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC11.34□□□□□ -0.59
Igkv4-54A0A0G2JES9 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC11.34□□□□□ -0.59
Igkv4-54A0A0G2JES9 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Igkv4-54A0A0G2JES9 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Igkv4-54A0A0G2JES9 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Igkv4-54A0A0G2JES9 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Igkv4-54A0A0G2JES9 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Igkv4-54A0A0G2JES9 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC11.34□□□□□ -0.59
Igkv4-54A0A0G2JES9 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
Igkv4-54A0A0G2JES9 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC11.34□□□□□ -0.59
Igkv4-54A0A0G2JES9 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Igkv4-54A0A0G2JES9 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Igkv4-54A0A0G2JES9 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC11.34□□□□□ -0.59
Igkv4-54A0A0G2JES9 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Igkv4-54A0A0G2JES9 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Igkv4-54A0A0G2JES9 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Igkv4-54A0A0G2JES9 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Igkv4-54A0A0G2JES9 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC11.33□□□□□ -0.6
Igkv4-54A0A0G2JES9 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Igkv4-54A0A0G2JES9 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC11.33□□□□□ -0.6
Igkv4-54A0A0G2JES9 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Igkv4-54A0A0G2JES9 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Igkv4-54A0A0G2JES9 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Igkv4-54A0A0G2JES9 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Igkv4-54A0A0G2JES9 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Igkv4-54A0A0G2JES9 Gm6858-201ENSMUST00000208582 1468 ntBASIC11.33□□□□□ -0.6
Igkv4-54A0A0G2JES9 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Igkv4-54A0A0G2JES9 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Igkv4-54A0A0G2JES9 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Igkv4-54A0A0G2JES9 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Igkv4-54A0A0G2JES9 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Igkv4-54A0A0G2JES9 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.6
Igkv4-54A0A0G2JES9 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC11.33□□□□□ -0.6
Igkv4-54A0A0G2JES9 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Igkv4-54A0A0G2JES9 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC11.33□□□□□ -0.6
Igkv4-54A0A0G2JES9 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC11.33□□□□□ -0.6
Igkv4-54A0A0G2JES9 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Igkv4-54A0A0G2JES9 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC11.33□□□□□ -0.6
Igkv4-54A0A0G2JES9 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC11.33□□□□□ -0.6
Igkv4-54A0A0G2JES9 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Igkv4-54A0A0G2JES9 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Igkv4-54A0A0G2JES9 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Igkv4-54A0A0G2JES9 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Igkv4-54A0A0G2JES9 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Igkv4-54A0A0G2JES9 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC11.33□□□□□ -0.6
Igkv4-54A0A0G2JES9 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Igkv4-54A0A0G2JES9 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC11.33□□□□□ -0.6
Igkv4-54A0A0G2JES9 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Igkv4-54A0A0G2JES9 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Igkv4-54A0A0G2JES9 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Igkv4-54A0A0G2JES9 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Igkv4-54A0A0G2JES9 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Igkv4-54A0A0G2JES9 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
Igkv4-54A0A0G2JES9 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Igkv4-54A0A0G2JES9 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Igkv4-54A0A0G2JES9 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Igkv4-54A0A0G2JES9 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Igkv4-54A0A0G2JES9 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Igkv4-54A0A0G2JES9 Gm28265-201ENSMUST00000188201 2319 ntBASIC11.32□□□□□ -0.6
Igkv4-54A0A0G2JES9 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Igkv4-54A0A0G2JES9 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Igkv4-54A0A0G2JES9 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Igkv4-54A0A0G2JES9 Gm37166-201ENSMUST00000195473 2474 ntBASIC11.32□□□□□ -0.6
Igkv4-54A0A0G2JES9 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Igkv4-54A0A0G2JES9 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Igkv4-54A0A0G2JES9 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Igkv4-54A0A0G2JES9 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Igkv4-54A0A0G2JES9 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Igkv4-54A0A0G2JES9 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Igkv4-54A0A0G2JES9 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Igkv4-54A0A0G2JES9 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Igkv4-54A0A0G2JES9 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC11.32□□□□□ -0.6
Igkv4-54A0A0G2JES9 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Igkv4-54A0A0G2JES9 Rprl3-201ENSMUST00000157400 290 ntBASIC11.32□□□□□ -0.6
Igkv4-54A0A0G2JES9 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Igkv4-54A0A0G2JES9 Gm10459-201ENSMUST00000202708 1155 ntBASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms