Protein–RNA interactions for Protein: A0A0B4J1G9

Trbv5, T cell receptor beta, variable 5 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv5A0A0B4J1G9 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv5A0A0B4J1G9 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv5A0A0B4J1G9 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Trbv5A0A0B4J1G9 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Trbv5A0A0B4J1G9 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Trbv5A0A0B4J1G9 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC12.82□□□□□ -0.36
Trbv5A0A0B4J1G9 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv5A0A0B4J1G9 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Trbv5A0A0B4J1G9 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv5A0A0B4J1G9 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv5A0A0B4J1G9 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv5A0A0B4J1G9 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv5A0A0B4J1G9 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv5A0A0B4J1G9 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Trbv5A0A0B4J1G9 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Trbv5A0A0B4J1G9 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv5A0A0B4J1G9 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv5A0A0B4J1G9 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv5A0A0B4J1G9 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv5A0A0B4J1G9 Gm38042-201ENSMUST00000191614 5208 ntBASIC12.81□□□□□ -0.36
Trbv5A0A0B4J1G9 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv5A0A0B4J1G9 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv5A0A0B4J1G9 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC12.81□□□□□ -0.36
Trbv5A0A0B4J1G9 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC12.81□□□□□ -0.36
Trbv5A0A0B4J1G9 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC12.81□□□□□ -0.36
Trbv5A0A0B4J1G9 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv5A0A0B4J1G9 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
Trbv5A0A0B4J1G9 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv5A0A0B4J1G9 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv5A0A0B4J1G9 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv5A0A0B4J1G9 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv5A0A0B4J1G9 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Trbv5A0A0B4J1G9 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv5A0A0B4J1G9 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv5A0A0B4J1G9 Gm21596-201ENSMUST00000178049 1316 ntBASIC12.81□□□□□ -0.36
Trbv5A0A0B4J1G9 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC12.81□□□□□ -0.36
Trbv5A0A0B4J1G9 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv5A0A0B4J1G9 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv5A0A0B4J1G9 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv5A0A0B4J1G9 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv5A0A0B4J1G9 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv5A0A0B4J1G9 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv5A0A0B4J1G9 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv5A0A0B4J1G9 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv5A0A0B4J1G9 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv5A0A0B4J1G9 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv5A0A0B4J1G9 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC12.8□□□□□ -0.36
Trbv5A0A0B4J1G9 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv5A0A0B4J1G9 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv5A0A0B4J1G9 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv5A0A0B4J1G9 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv5A0A0B4J1G9 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv5A0A0B4J1G9 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Trbv5A0A0B4J1G9 Gm13158-201ENSMUST00000122007 736 ntBASIC12.8□□□□□ -0.36
Trbv5A0A0B4J1G9 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv5A0A0B4J1G9 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv5A0A0B4J1G9 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv5A0A0B4J1G9 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC12.8□□□□□ -0.36
Trbv5A0A0B4J1G9 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC12.8□□□□□ -0.36
Trbv5A0A0B4J1G9 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
Trbv5A0A0B4J1G9 AC122769.4-201ENSMUST00000228166 901 ntBASIC12.8□□□□□ -0.36
Trbv5A0A0B4J1G9 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv5A0A0B4J1G9 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC12.8□□□□□ -0.36
Trbv5A0A0B4J1G9 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv5A0A0B4J1G9 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv5A0A0B4J1G9 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC12.8□□□□□ -0.36
Trbv5A0A0B4J1G9 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv5A0A0B4J1G9 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv5A0A0B4J1G9 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv5A0A0B4J1G9 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv5A0A0B4J1G9 Gm37912-201ENSMUST00000191895 3076 ntBASIC12.8□□□□□ -0.36
Trbv5A0A0B4J1G9 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv5A0A0B4J1G9 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv5A0A0B4J1G9 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv5A0A0B4J1G9 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Trbv5A0A0B4J1G9 Gm38058-201ENSMUST00000194323 4368 ntBASIC12.79□□□□□ -0.36
Trbv5A0A0B4J1G9 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv5A0A0B4J1G9 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv5A0A0B4J1G9 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC12.79□□□□□ -0.36
Trbv5A0A0B4J1G9 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv5A0A0B4J1G9 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv5A0A0B4J1G9 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv5A0A0B4J1G9 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Trbv5A0A0B4J1G9 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv5A0A0B4J1G9 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv5A0A0B4J1G9 Gm12933-201ENSMUST00000120203 872 ntBASIC12.79□□□□□ -0.36
Trbv5A0A0B4J1G9 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC12.79□□□□□ -0.36
Trbv5A0A0B4J1G9 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv5A0A0B4J1G9 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv5A0A0B4J1G9 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv5A0A0B4J1G9 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv5A0A0B4J1G9 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv5A0A0B4J1G9 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC12.79□□□□□ -0.36
Trbv5A0A0B4J1G9 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv5A0A0B4J1G9 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv5A0A0B4J1G9 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv5A0A0B4J1G9 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
Trbv5A0A0B4J1G9 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv5A0A0B4J1G9 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Trbv5A0A0B4J1G9 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms