Protein–RNA interactions for Protein: A0A0A6YXG2

Ighv1-56, Immunoglobulin heavy variable 1-56 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-56A0A0A6YXG2 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ighv1-56A0A0A6YXG2 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Ighv1-56A0A0A6YXG2 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ighv1-56A0A0A6YXG2 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ighv1-56A0A0A6YXG2 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Ighv1-56A0A0A6YXG2 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ighv1-56A0A0A6YXG2 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ighv1-56A0A0A6YXG2 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ighv1-56A0A0A6YXG2 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Ighv1-56A0A0A6YXG2 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ighv1-56A0A0A6YXG2 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Ighv1-56A0A0A6YXG2 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Ighv1-56A0A0A6YXG2 Gm44729-201ENSMUST00000206759 2052 ntBASIC10.69□□□□□ -0.7
Ighv1-56A0A0A6YXG2 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ighv1-56A0A0A6YXG2 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ighv1-56A0A0A6YXG2 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ighv1-56A0A0A6YXG2 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Ighv1-56A0A0A6YXG2 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ighv1-56A0A0A6YXG2 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Ighv1-56A0A0A6YXG2 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Ighv1-56A0A0A6YXG2 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Ighv1-56A0A0A6YXG2 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ighv1-56A0A0A6YXG2 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ighv1-56A0A0A6YXG2 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC10.68□□□□□ -0.7
Ighv1-56A0A0A6YXG2 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ighv1-56A0A0A6YXG2 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ighv1-56A0A0A6YXG2 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Ighv1-56A0A0A6YXG2 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC10.68□□□□□ -0.7
Ighv1-56A0A0A6YXG2 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Ighv1-56A0A0A6YXG2 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC10.68□□□□□ -0.7
Ighv1-56A0A0A6YXG2 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ighv1-56A0A0A6YXG2 Gm26039-201ENSMUST00000158152 144 ntBASIC10.68□□□□□ -0.7
Ighv1-56A0A0A6YXG2 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ighv1-56A0A0A6YXG2 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC10.68□□□□□ -0.7
Ighv1-56A0A0A6YXG2 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
Ighv1-56A0A0A6YXG2 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Ighv1-56A0A0A6YXG2 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC10.68□□□□□ -0.7
Ighv1-56A0A0A6YXG2 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ighv1-56A0A0A6YXG2 Gm37055-201ENSMUST00000191866 133 ntBASIC10.68□□□□□ -0.7
Ighv1-56A0A0A6YXG2 AC122351.1-201ENSMUST00000220467 126 ntBASIC10.68□□□□□ -0.7
Ighv1-56A0A0A6YXG2 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC10.68□□□□□ -0.7
Ighv1-56A0A0A6YXG2 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Ighv1-56A0A0A6YXG2 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ighv1-56A0A0A6YXG2 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Ighv1-56A0A0A6YXG2 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ighv1-56A0A0A6YXG2 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ighv1-56A0A0A6YXG2 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ighv1-56A0A0A6YXG2 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Ighv1-56A0A0A6YXG2 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Ighv1-56A0A0A6YXG2 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ighv1-56A0A0A6YXG2 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ighv1-56A0A0A6YXG2 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ighv1-56A0A0A6YXG2 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ighv1-56A0A0A6YXG2 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ighv1-56A0A0A6YXG2 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ighv1-56A0A0A6YXG2 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ighv1-56A0A0A6YXG2 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ighv1-56A0A0A6YXG2 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ighv1-56A0A0A6YXG2 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ighv1-56A0A0A6YXG2 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ighv1-56A0A0A6YXG2 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ighv1-56A0A0A6YXG2 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ighv1-56A0A0A6YXG2 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Ighv1-56A0A0A6YXG2 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Ighv1-56A0A0A6YXG2 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC10.67□□□□□ -0.7
Ighv1-56A0A0A6YXG2 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ighv1-56A0A0A6YXG2 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ighv1-56A0A0A6YXG2 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC10.67□□□□□ -0.7
Ighv1-56A0A0A6YXG2 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ighv1-56A0A0A6YXG2 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ighv1-56A0A0A6YXG2 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ighv1-56A0A0A6YXG2 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ighv1-56A0A0A6YXG2 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ighv1-56A0A0A6YXG2 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Ighv1-56A0A0A6YXG2 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC10.67□□□□□ -0.7
Ighv1-56A0A0A6YXG2 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ighv1-56A0A0A6YXG2 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ighv1-56A0A0A6YXG2 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ighv1-56A0A0A6YXG2 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ighv1-56A0A0A6YXG2 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Ighv1-56A0A0A6YXG2 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Ighv1-56A0A0A6YXG2 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC10.67□□□□□ -0.7
Ighv1-56A0A0A6YXG2 Gm9484-201ENSMUST00000195892 1159 ntBASIC10.67□□□□□ -0.7
Ighv1-56A0A0A6YXG2 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ighv1-56A0A0A6YXG2 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC10.67□□□□□ -0.7
Ighv1-56A0A0A6YXG2 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ighv1-56A0A0A6YXG2 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC10.67□□□□□ -0.7
Ighv1-56A0A0A6YXG2 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ighv1-56A0A0A6YXG2 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Ighv1-56A0A0A6YXG2 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ighv1-56A0A0A6YXG2 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ighv1-56A0A0A6YXG2 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC10.67□□□□□ -0.7
Ighv1-56A0A0A6YXG2 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Ighv1-56A0A0A6YXG2 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ighv1-56A0A0A6YXG2 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Ighv1-56A0A0A6YXG2 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ighv1-56A0A0A6YXG2 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Ighv1-56A0A0A6YXG2 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ighv1-56A0A0A6YXG2 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ighv1-56A0A0A6YXG2 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms