Protein–RNA interactions for Protein: A0A075B6B4

Trav6-4, T cell receptor alpha variable 6-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-4A0A075B6B4 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC12.23□□□□□ -0.45
Trav6-4A0A075B6B4 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6-4A0A075B6B4 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6-4A0A075B6B4 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6-4A0A075B6B4 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6-4A0A075B6B4 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6-4A0A075B6B4 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6-4A0A075B6B4 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6-4A0A075B6B4 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC12.22□□□□□ -0.45
Trav6-4A0A075B6B4 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6-4A0A075B6B4 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6-4A0A075B6B4 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6-4A0A075B6B4 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6-4A0A075B6B4 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6-4A0A075B6B4 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6-4A0A075B6B4 AC108846.1-201ENSMUST00000214531 513 ntBASIC12.22□□□□□ -0.45
Trav6-4A0A075B6B4 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6-4A0A075B6B4 Gm18669-201ENSMUST00000216049 778 ntBASIC12.22□□□□□ -0.45
Trav6-4A0A075B6B4 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC12.22□□□□□ -0.45
Trav6-4A0A075B6B4 AC124569.2-201ENSMUST00000225998 818 ntBASIC12.22□□□□□ -0.45
Trav6-4A0A075B6B4 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Trav6-4A0A075B6B4 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6-4A0A075B6B4 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6-4A0A075B6B4 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6-4A0A075B6B4 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6-4A0A075B6B4 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6-4A0A075B6B4 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Trav6-4A0A075B6B4 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6-4A0A075B6B4 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6-4A0A075B6B4 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6-4A0A075B6B4 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Trav6-4A0A075B6B4 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6-4A0A075B6B4 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6-4A0A075B6B4 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6-4A0A075B6B4 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6-4A0A075B6B4 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6-4A0A075B6B4 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6-4A0A075B6B4 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6-4A0A075B6B4 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6-4A0A075B6B4 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6-4A0A075B6B4 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6-4A0A075B6B4 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6-4A0A075B6B4 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6-4A0A075B6B4 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6-4A0A075B6B4 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6-4A0A075B6B4 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC12.21□□□□□ -0.45
Trav6-4A0A075B6B4 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC12.21□□□□□ -0.45
Trav6-4A0A075B6B4 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6-4A0A075B6B4 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC12.21□□□□□ -0.45
Trav6-4A0A075B6B4 Ank2-226ENSMUST00000189368 339 ntBASIC12.21□□□□□ -0.45
Trav6-4A0A075B6B4 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC12.21□□□□□ -0.45
Trav6-4A0A075B6B4 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6-4A0A075B6B4 AC153889.1-201ENSMUST00000219257 330 ntBASIC12.21□□□□□ -0.45
Trav6-4A0A075B6B4 AC127349.1-201ENSMUST00000224590 266 ntBASIC12.21□□□□□ -0.45
Trav6-4A0A075B6B4 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6-4A0A075B6B4 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6-4A0A075B6B4 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav6-4A0A075B6B4 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Trav6-4A0A075B6B4 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC12.21□□□□□ -0.46
Trav6-4A0A075B6B4 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav6-4A0A075B6B4 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav6-4A0A075B6B4 Rbfox2-206ENSMUST00000227314 1810 ntBASIC12.21□□□□□ -0.46
Trav6-4A0A075B6B4 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6-4A0A075B6B4 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6-4A0A075B6B4 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6-4A0A075B6B4 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6-4A0A075B6B4 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6-4A0A075B6B4 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6-4A0A075B6B4 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6-4A0A075B6B4 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC12.2□□□□□ -0.46
Trav6-4A0A075B6B4 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6-4A0A075B6B4 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6-4A0A075B6B4 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6-4A0A075B6B4 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6-4A0A075B6B4 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6-4A0A075B6B4 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6-4A0A075B6B4 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6-4A0A075B6B4 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6-4A0A075B6B4 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC12.2□□□□□ -0.46
Trav6-4A0A075B6B4 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
Trav6-4A0A075B6B4 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC12.2□□□□□ -0.46
Trav6-4A0A075B6B4 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC12.2□□□□□ -0.46
Trav6-4A0A075B6B4 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6-4A0A075B6B4 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC12.2□□□□□ -0.46
Trav6-4A0A075B6B4 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC12.2□□□□□ -0.46
Trav6-4A0A075B6B4 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC12.2□□□□□ -0.46
Trav6-4A0A075B6B4 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC12.2□□□□□ -0.46
Trav6-4A0A075B6B4 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6-4A0A075B6B4 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6-4A0A075B6B4 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6-4A0A075B6B4 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6-4A0A075B6B4 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6-4A0A075B6B4 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6-4A0A075B6B4 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6-4A0A075B6B4 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6-4A0A075B6B4 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Trav6-4A0A075B6B4 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6-4A0A075B6B4 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6-4A0A075B6B4 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6-4A0A075B6B4 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms