Protein–RNA interactions for Protein: A0A075B631

Trav9n-4, T cell receptor alpha variable 9N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-4A0A075B631 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trav9n-4A0A075B631 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav9n-4A0A075B631 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC10.87□□□□□ -0.67
Trav9n-4A0A075B631 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trav9n-4A0A075B631 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav9n-4A0A075B631 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav9n-4A0A075B631 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC10.87□□□□□ -0.67
Trav9n-4A0A075B631 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav9n-4A0A075B631 AC133083.1-201ENSMUST00000221736 2209 ntBASIC10.87□□□□□ -0.67
Trav9n-4A0A075B631 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC10.87□□□□□ -0.67
Trav9n-4A0A075B631 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav9n-4A0A075B631 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC10.87□□□□□ -0.67
Trav9n-4A0A075B631 Gm27389-201ENSMUST00000183622 195 ntBASIC10.87□□□□□ -0.67
Trav9n-4A0A075B631 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav9n-4A0A075B631 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trav9n-4A0A075B631 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Trav9n-4A0A075B631 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav9n-4A0A075B631 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav9n-4A0A075B631 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav9n-4A0A075B631 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Trav9n-4A0A075B631 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav9n-4A0A075B631 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Trav9n-4A0A075B631 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trav9n-4A0A075B631 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trav9n-4A0A075B631 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav9n-4A0A075B631 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Trav9n-4A0A075B631 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav9n-4A0A075B631 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Trav9n-4A0A075B631 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav9n-4A0A075B631 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav9n-4A0A075B631 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav9n-4A0A075B631 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav9n-4A0A075B631 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav9n-4A0A075B631 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC10.87□□□□□ -0.67
Trav9n-4A0A075B631 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav9n-4A0A075B631 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav9n-4A0A075B631 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav9n-4A0A075B631 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Trav9n-4A0A075B631 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav9n-4A0A075B631 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav9n-4A0A075B631 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav9n-4A0A075B631 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav9n-4A0A075B631 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
Trav9n-4A0A075B631 Gm14026-201ENSMUST00000120625 1789 ntBASIC10.86□□□□□ -0.67
Trav9n-4A0A075B631 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav9n-4A0A075B631 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC10.86□□□□□ -0.67
Trav9n-4A0A075B631 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC10.86□□□□□ -0.67
Trav9n-4A0A075B631 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC10.86□□□□□ -0.67
Trav9n-4A0A075B631 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trav9n-4A0A075B631 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC10.86□□□□□ -0.67
Trav9n-4A0A075B631 Gm45058-201ENSMUST00000205810 766 ntBASIC10.86□□□□□ -0.67
Trav9n-4A0A075B631 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trav9n-4A0A075B631 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Trav9n-4A0A075B631 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav9n-4A0A075B631 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC10.86□□□□□ -0.67
Trav9n-4A0A075B631 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC10.86□□□□□ -0.67
Trav9n-4A0A075B631 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav9n-4A0A075B631 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav9n-4A0A075B631 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC10.86□□□□□ -0.67
Trav9n-4A0A075B631 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav9n-4A0A075B631 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav9n-4A0A075B631 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav9n-4A0A075B631 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Trav9n-4A0A075B631 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav9n-4A0A075B631 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav9n-4A0A075B631 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav9n-4A0A075B631 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav9n-4A0A075B631 Gm32996-201ENSMUST00000199828 1447 ntBASIC10.85□□□□□ -0.67
Trav9n-4A0A075B631 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav9n-4A0A075B631 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav9n-4A0A075B631 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav9n-4A0A075B631 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav9n-4A0A075B631 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav9n-4A0A075B631 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav9n-4A0A075B631 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav9n-4A0A075B631 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav9n-4A0A075B631 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
Trav9n-4A0A075B631 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav9n-4A0A075B631 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav9n-4A0A075B631 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
Trav9n-4A0A075B631 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Trav9n-4A0A075B631 Gm43799-201ENSMUST00000201845 579 ntBASIC10.85□□□□□ -0.67
Trav9n-4A0A075B631 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav9n-4A0A075B631 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC10.85□□□□□ -0.67
Trav9n-4A0A075B631 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC10.85□□□□□ -0.67
Trav9n-4A0A075B631 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav9n-4A0A075B631 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
Trav9n-4A0A075B631 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC10.85□□□□□ -0.67
Trav9n-4A0A075B631 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav9n-4A0A075B631 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav9n-4A0A075B631 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav9n-4A0A075B631 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Trav9n-4A0A075B631 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav9n-4A0A075B631 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav9n-4A0A075B631 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav9n-4A0A075B631 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav9n-4A0A075B631 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav9n-4A0A075B631 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav9n-4A0A075B631 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav9n-4A0A075B631 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms