Protein–RNA interactions for Protein: A0A075B607

Trav14-3, T cell receptor alpha variable 14-3 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav14-3A0A075B607 Gm6190-201ENSMUST00000220683 1374 ntBASIC11.79□□□□□ -0.52
Trav14-3A0A075B607 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav14-3A0A075B607 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Trav14-3A0A075B607 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav14-3A0A075B607 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
Trav14-3A0A075B607 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav14-3A0A075B607 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav14-3A0A075B607 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
Trav14-3A0A075B607 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav14-3A0A075B607 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Trav14-3A0A075B607 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Trav14-3A0A075B607 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav14-3A0A075B607 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Trav14-3A0A075B607 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Trav14-3A0A075B607 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav14-3A0A075B607 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav14-3A0A075B607 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav14-3A0A075B607 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
Trav14-3A0A075B607 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav14-3A0A075B607 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav14-3A0A075B607 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav14-3A0A075B607 Gm37292-201ENSMUST00000192062 758 ntBASIC11.79□□□□□ -0.52
Trav14-3A0A075B607 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav14-3A0A075B607 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav14-3A0A075B607 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav14-3A0A075B607 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav14-3A0A075B607 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Trav14-3A0A075B607 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav14-3A0A075B607 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav14-3A0A075B607 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav14-3A0A075B607 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav14-3A0A075B607 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav14-3A0A075B607 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav14-3A0A075B607 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav14-3A0A075B607 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav14-3A0A075B607 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC11.78□□□□□ -0.52
Trav14-3A0A075B607 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav14-3A0A075B607 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
Trav14-3A0A075B607 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Trav14-3A0A075B607 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav14-3A0A075B607 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC11.78□□□□□ -0.52
Trav14-3A0A075B607 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC11.78□□□□□ -0.52
Trav14-3A0A075B607 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav14-3A0A075B607 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav14-3A0A075B607 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav14-3A0A075B607 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav14-3A0A075B607 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav14-3A0A075B607 Slc35b2-202ENSMUST00000223987 1766 ntBASIC11.78□□□□□ -0.52
Trav14-3A0A075B607 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav14-3A0A075B607 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Trav14-3A0A075B607 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC11.78□□□□□ -0.52
Trav14-3A0A075B607 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav14-3A0A075B607 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC11.78□□□□□ -0.52
Trav14-3A0A075B607 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav14-3A0A075B607 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
Trav14-3A0A075B607 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav14-3A0A075B607 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav14-3A0A075B607 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav14-3A0A075B607 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav14-3A0A075B607 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav14-3A0A075B607 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Trav14-3A0A075B607 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav14-3A0A075B607 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav14-3A0A075B607 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Trav14-3A0A075B607 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Trav14-3A0A075B607 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav14-3A0A075B607 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC11.78□□□□□ -0.52
Trav14-3A0A075B607 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Trav14-3A0A075B607 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav14-3A0A075B607 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav14-3A0A075B607 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav14-3A0A075B607 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav14-3A0A075B607 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav14-3A0A075B607 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav14-3A0A075B607 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC11.77□□□□□ -0.52
Trav14-3A0A075B607 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Trav14-3A0A075B607 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Trav14-3A0A075B607 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav14-3A0A075B607 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav14-3A0A075B607 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav14-3A0A075B607 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Trav14-3A0A075B607 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC11.77□□□□□ -0.52
Trav14-3A0A075B607 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC11.77□□□□□ -0.53
Trav14-3A0A075B607 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav14-3A0A075B607 Gm13148-201ENSMUST00000118892 745 ntBASIC11.77□□□□□ -0.53
Trav14-3A0A075B607 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC11.77□□□□□ -0.53
Trav14-3A0A075B607 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC11.77□□□□□ -0.53
Trav14-3A0A075B607 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav14-3A0A075B607 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav14-3A0A075B607 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav14-3A0A075B607 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav14-3A0A075B607 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC11.77□□□□□ -0.53
Trav14-3A0A075B607 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav14-3A0A075B607 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav14-3A0A075B607 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav14-3A0A075B607 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav14-3A0A075B607 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Trav14-3A0A075B607 Dio3-201ENSMUST00000097228 1449 ntBASIC11.77□□□□□ -0.53
Trav14-3A0A075B607 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav14-3A0A075B607 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms