Protein–RNA interactions for Protein: A0A075B601

Trav9-1, T cell receptor alpha variable 9-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-1A0A075B601 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav9-1A0A075B601 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC12.42□□□□□ -0.42
Trav9-1A0A075B601 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Trav9-1A0A075B601 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav9-1A0A075B601 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav9-1A0A075B601 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Trav9-1A0A075B601 Rbfox2-206ENSMUST00000227314 1810 ntBASIC12.42□□□□□ -0.42
Trav9-1A0A075B601 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav9-1A0A075B601 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav9-1A0A075B601 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav9-1A0A075B601 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav9-1A0A075B601 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC12.42□□□□□ -0.42
Trav9-1A0A075B601 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav9-1A0A075B601 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav9-1A0A075B601 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav9-1A0A075B601 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC12.42□□□□□ -0.42
Trav9-1A0A075B601 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC12.42□□□□□ -0.42
Trav9-1A0A075B601 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC12.42□□□□□ -0.42
Trav9-1A0A075B601 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Trav9-1A0A075B601 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav9-1A0A075B601 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav9-1A0A075B601 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Trav9-1A0A075B601 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC12.42□□□□□ -0.42
Trav9-1A0A075B601 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav9-1A0A075B601 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
Trav9-1A0A075B601 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav9-1A0A075B601 Ptprs-211ENSMUST00000223859 5588 ntBASIC12.42□□□□□ -0.42
Trav9-1A0A075B601 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav9-1A0A075B601 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Trav9-1A0A075B601 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav9-1A0A075B601 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav9-1A0A075B601 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
Trav9-1A0A075B601 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Trav9-1A0A075B601 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav9-1A0A075B601 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav9-1A0A075B601 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav9-1A0A075B601 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav9-1A0A075B601 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav9-1A0A075B601 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav9-1A0A075B601 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC12.41□□□□□ -0.42
Trav9-1A0A075B601 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC12.41□□□□□ -0.42
Trav9-1A0A075B601 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav9-1A0A075B601 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav9-1A0A075B601 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav9-1A0A075B601 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav9-1A0A075B601 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav9-1A0A075B601 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav9-1A0A075B601 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav9-1A0A075B601 Gm6433-201ENSMUST00000118634 875 ntBASIC12.41□□□□□ -0.42
Trav9-1A0A075B601 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav9-1A0A075B601 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav9-1A0A075B601 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav9-1A0A075B601 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav9-1A0A075B601 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav9-1A0A075B601 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC12.41□□□□□ -0.42
Trav9-1A0A075B601 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Trav9-1A0A075B601 Gm18101-201ENSMUST00000215769 548 ntBASIC12.41□□□□□ -0.42
Trav9-1A0A075B601 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav9-1A0A075B601 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav9-1A0A075B601 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav9-1A0A075B601 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav9-1A0A075B601 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Trav9-1A0A075B601 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav9-1A0A075B601 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Trav9-1A0A075B601 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav9-1A0A075B601 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav9-1A0A075B601 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Trav9-1A0A075B601 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Trav9-1A0A075B601 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav9-1A0A075B601 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav9-1A0A075B601 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav9-1A0A075B601 Gm44443-201ENSMUST00000204396 5633 ntBASIC12.41□□□□□ -0.42
Trav9-1A0A075B601 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav9-1A0A075B601 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav9-1A0A075B601 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav9-1A0A075B601 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC12.41□□□□□ -0.42
Trav9-1A0A075B601 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav9-1A0A075B601 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav9-1A0A075B601 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.42
Trav9-1A0A075B601 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav9-1A0A075B601 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav9-1A0A075B601 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav9-1A0A075B601 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav9-1A0A075B601 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
Trav9-1A0A075B601 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav9-1A0A075B601 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav9-1A0A075B601 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav9-1A0A075B601 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav9-1A0A075B601 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC12.4□□□□□ -0.42
Trav9-1A0A075B601 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav9-1A0A075B601 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav9-1A0A075B601 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav9-1A0A075B601 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Trav9-1A0A075B601 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
Trav9-1A0A075B601 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav9-1A0A075B601 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Trav9-1A0A075B601 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav9-1A0A075B601 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Trav9-1A0A075B601 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.42
Trav9-1A0A075B601 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms