Protein–RNA interactions for Protein: A0A075B5Z8

Trav6-1, T cell receptor alpha variable 6-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-1A0A075B5Z8 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6-1A0A075B5Z8 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6-1A0A075B5Z8 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC12.76□□□□□ -0.37
Trav6-1A0A075B5Z8 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC12.76□□□□□ -0.37
Trav6-1A0A075B5Z8 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6-1A0A075B5Z8 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC12.76□□□□□ -0.37
Trav6-1A0A075B5Z8 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC12.76□□□□□ -0.37
Trav6-1A0A075B5Z8 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6-1A0A075B5Z8 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6-1A0A075B5Z8 AC122351.1-201ENSMUST00000220467 126 ntBASIC12.76□□□□□ -0.37
Trav6-1A0A075B5Z8 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC12.76□□□□□ -0.37
Trav6-1A0A075B5Z8 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6-1A0A075B5Z8 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC12.76□□□□□ -0.37
Trav6-1A0A075B5Z8 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6-1A0A075B5Z8 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6-1A0A075B5Z8 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Trav6-1A0A075B5Z8 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6-1A0A075B5Z8 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6-1A0A075B5Z8 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6-1A0A075B5Z8 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6-1A0A075B5Z8 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6-1A0A075B5Z8 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6-1A0A075B5Z8 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC12.76□□□□□ -0.37
Trav6-1A0A075B5Z8 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Trav6-1A0A075B5Z8 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6-1A0A075B5Z8 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC12.75□□□□□ -0.37
Trav6-1A0A075B5Z8 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Trav6-1A0A075B5Z8 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6-1A0A075B5Z8 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6-1A0A075B5Z8 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC12.75□□□□□ -0.37
Trav6-1A0A075B5Z8 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6-1A0A075B5Z8 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6-1A0A075B5Z8 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6-1A0A075B5Z8 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6-1A0A075B5Z8 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC12.75□□□□□ -0.37
Trav6-1A0A075B5Z8 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6-1A0A075B5Z8 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
Trav6-1A0A075B5Z8 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6-1A0A075B5Z8 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6-1A0A075B5Z8 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6-1A0A075B5Z8 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6-1A0A075B5Z8 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6-1A0A075B5Z8 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
Trav6-1A0A075B5Z8 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Trav6-1A0A075B5Z8 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6-1A0A075B5Z8 Mir1668-201ENSMUST00000184114 107 ntBASIC12.75□□□□□ -0.37
Trav6-1A0A075B5Z8 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC12.75□□□□□ -0.37
Trav6-1A0A075B5Z8 Gm8520-201ENSMUST00000186517 868 ntBASIC12.75□□□□□ -0.37
Trav6-1A0A075B5Z8 Gm43598-201ENSMUST00000202482 2479 ntBASIC12.75□□□□□ -0.37
Trav6-1A0A075B5Z8 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6-1A0A075B5Z8 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6-1A0A075B5Z8 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
Trav6-1A0A075B5Z8 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6-1A0A075B5Z8 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6-1A0A075B5Z8 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6-1A0A075B5Z8 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6-1A0A075B5Z8 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC12.75□□□□□ -0.37
Trav6-1A0A075B5Z8 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6-1A0A075B5Z8 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6-1A0A075B5Z8 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6-1A0A075B5Z8 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6-1A0A075B5Z8 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC12.75□□□□□ -0.37
Trav6-1A0A075B5Z8 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6-1A0A075B5Z8 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6-1A0A075B5Z8 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6-1A0A075B5Z8 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6-1A0A075B5Z8 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC12.75□□□□□ -0.37
Trav6-1A0A075B5Z8 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6-1A0A075B5Z8 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6-1A0A075B5Z8 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6-1A0A075B5Z8 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Trav6-1A0A075B5Z8 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6-1A0A075B5Z8 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC12.74□□□□□ -0.37
Trav6-1A0A075B5Z8 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6-1A0A075B5Z8 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Trav6-1A0A075B5Z8 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6-1A0A075B5Z8 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6-1A0A075B5Z8 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
Trav6-1A0A075B5Z8 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6-1A0A075B5Z8 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6-1A0A075B5Z8 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6-1A0A075B5Z8 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6-1A0A075B5Z8 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6-1A0A075B5Z8 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6-1A0A075B5Z8 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6-1A0A075B5Z8 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6-1A0A075B5Z8 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6-1A0A075B5Z8 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6-1A0A075B5Z8 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC12.74□□□□□ -0.37
Trav6-1A0A075B5Z8 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC12.74□□□□□ -0.37
Trav6-1A0A075B5Z8 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6-1A0A075B5Z8 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6-1A0A075B5Z8 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Trav6-1A0A075B5Z8 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6-1A0A075B5Z8 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC12.74□□□□□ -0.37
Trav6-1A0A075B5Z8 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6-1A0A075B5Z8 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6-1A0A075B5Z8 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Trav6-1A0A075B5Z8 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6-1A0A075B5Z8 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms