Protein–RNA interactions for Protein: A0A075B5I2

Trbv4, T cell receptor beta, variable 10 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv4A0A075B5I2 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC15.9■□□□□ 0.14
Trbv4A0A075B5I2 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC15.9■□□□□ 0.14
Trbv4A0A075B5I2 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trbv4A0A075B5I2 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC15.9■□□□□ 0.14
Trbv4A0A075B5I2 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
Trbv4A0A075B5I2 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trbv4A0A075B5I2 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC15.9■□□□□ 0.14
Trbv4A0A075B5I2 Gm33142-201ENSMUST00000193913 867 ntBASIC15.9■□□□□ 0.14
Trbv4A0A075B5I2 Otx2os1-206ENSMUST00000228153 787 ntBASIC15.9■□□□□ 0.14
Trbv4A0A075B5I2 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trbv4A0A075B5I2 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trbv4A0A075B5I2 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Trbv4A0A075B5I2 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trbv4A0A075B5I2 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Trbv4A0A075B5I2 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trbv4A0A075B5I2 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trbv4A0A075B5I2 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trbv4A0A075B5I2 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trbv4A0A075B5I2 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trbv4A0A075B5I2 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trbv4A0A075B5I2 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trbv4A0A075B5I2 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Trbv4A0A075B5I2 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Trbv4A0A075B5I2 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Trbv4A0A075B5I2 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trbv4A0A075B5I2 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC15.89■□□□□ 0.13
Trbv4A0A075B5I2 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
Trbv4A0A075B5I2 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
Trbv4A0A075B5I2 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trbv4A0A075B5I2 Gm7284-201ENSMUST00000131667 944 ntBASIC15.89■□□□□ 0.13
Trbv4A0A075B5I2 Gm44454-201ENSMUST00000198541 138 ntBASIC15.89■□□□□ 0.13
Trbv4A0A075B5I2 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC15.89■□□□□ 0.13
Trbv4A0A075B5I2 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trbv4A0A075B5I2 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC15.89■□□□□ 0.13
Trbv4A0A075B5I2 AC127349.1-201ENSMUST00000224590 266 ntBASIC15.89■□□□□ 0.13
Trbv4A0A075B5I2 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trbv4A0A075B5I2 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trbv4A0A075B5I2 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trbv4A0A075B5I2 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trbv4A0A075B5I2 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trbv4A0A075B5I2 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC15.89■□□□□ 0.13
Trbv4A0A075B5I2 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trbv4A0A075B5I2 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trbv4A0A075B5I2 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC15.89■□□□□ 0.13
Trbv4A0A075B5I2 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Trbv4A0A075B5I2 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trbv4A0A075B5I2 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trbv4A0A075B5I2 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trbv4A0A075B5I2 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC15.89■□□□□ 0.13
Trbv4A0A075B5I2 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trbv4A0A075B5I2 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv4A0A075B5I2 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv4A0A075B5I2 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv4A0A075B5I2 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv4A0A075B5I2 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC15.88■□□□□ 0.13
Trbv4A0A075B5I2 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv4A0A075B5I2 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Trbv4A0A075B5I2 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv4A0A075B5I2 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv4A0A075B5I2 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv4A0A075B5I2 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv4A0A075B5I2 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC15.88■□□□□ 0.13
Trbv4A0A075B5I2 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv4A0A075B5I2 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Trbv4A0A075B5I2 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv4A0A075B5I2 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv4A0A075B5I2 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Trbv4A0A075B5I2 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv4A0A075B5I2 Gm27528-202ENSMUST00000222916 2012 ntBASIC15.88■□□□□ 0.13
Trbv4A0A075B5I2 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv4A0A075B5I2 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv4A0A075B5I2 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv4A0A075B5I2 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv4A0A075B5I2 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv4A0A075B5I2 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv4A0A075B5I2 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv4A0A075B5I2 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv4A0A075B5I2 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv4A0A075B5I2 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv4A0A075B5I2 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv4A0A075B5I2 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
Trbv4A0A075B5I2 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv4A0A075B5I2 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv4A0A075B5I2 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Trbv4A0A075B5I2 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv4A0A075B5I2 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Trbv4A0A075B5I2 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv4A0A075B5I2 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv4A0A075B5I2 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv4A0A075B5I2 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv4A0A075B5I2 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv4A0A075B5I2 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC15.87■□□□□ 0.13
Trbv4A0A075B5I2 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv4A0A075B5I2 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC15.87■□□□□ 0.13
Trbv4A0A075B5I2 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
Trbv4A0A075B5I2 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv4A0A075B5I2 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv4A0A075B5I2 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC15.87■□□□□ 0.13
Trbv4A0A075B5I2 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv4A0A075B5I2 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms