Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC14.32□□□□□ -0.12
H2afb3S4R1G7 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
H2afb3S4R1G7 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
H2afb3S4R1G7 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
H2afb3S4R1G7 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
H2afb3S4R1G7 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
H2afb3S4R1G7 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
H2afb3S4R1G7 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
H2afb3S4R1G7 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC14.32□□□□□ -0.12
H2afb3S4R1G7 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC14.32□□□□□ -0.12
H2afb3S4R1G7 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC14.32□□□□□ -0.12
H2afb3S4R1G7 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
H2afb3S4R1G7 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
H2afb3S4R1G7 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
H2afb3S4R1G7 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
H2afb3S4R1G7 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
H2afb3S4R1G7 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
H2afb3S4R1G7 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
H2afb3S4R1G7 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
H2afb3S4R1G7 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
H2afb3S4R1G7 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
H2afb3S4R1G7 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
H2afb3S4R1G7 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
H2afb3S4R1G7 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC14.32□□□□□ -0.12
H2afb3S4R1G7 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC14.31□□□□□ -0.12
H2afb3S4R1G7 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
H2afb3S4R1G7 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
H2afb3S4R1G7 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
H2afb3S4R1G7 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
H2afb3S4R1G7 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
H2afb3S4R1G7 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
H2afb3S4R1G7 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
H2afb3S4R1G7 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC14.31□□□□□ -0.12
H2afb3S4R1G7 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
H2afb3S4R1G7 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC14.31□□□□□ -0.12
H2afb3S4R1G7 AC153526.5-201ENSMUST00000218661 2147 ntBASIC14.31□□□□□ -0.12
H2afb3S4R1G7 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
H2afb3S4R1G7 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC14.31□□□□□ -0.12
H2afb3S4R1G7 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
H2afb3S4R1G7 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
H2afb3S4R1G7 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
H2afb3S4R1G7 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
H2afb3S4R1G7 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
H2afb3S4R1G7 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
H2afb3S4R1G7 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
H2afb3S4R1G7 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
H2afb3S4R1G7 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
H2afb3S4R1G7 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
H2afb3S4R1G7 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
H2afb3S4R1G7 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
H2afb3S4R1G7 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC14.31□□□□□ -0.12
H2afb3S4R1G7 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
H2afb3S4R1G7 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
H2afb3S4R1G7 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
H2afb3S4R1G7 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
H2afb3S4R1G7 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
H2afb3S4R1G7 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
H2afb3S4R1G7 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
H2afb3S4R1G7 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
H2afb3S4R1G7 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC14.3□□□□□ -0.12
H2afb3S4R1G7 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
H2afb3S4R1G7 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
H2afb3S4R1G7 Gm18101-201ENSMUST00000215769 548 ntBASIC14.3□□□□□ -0.12
H2afb3S4R1G7 Gm21559-201ENSMUST00000220638 855 ntBASIC14.3□□□□□ -0.12
H2afb3S4R1G7 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
H2afb3S4R1G7 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
H2afb3S4R1G7 Gm8587-201ENSMUST00000076538 843 ntBASIC14.3□□□□□ -0.12
H2afb3S4R1G7 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
H2afb3S4R1G7 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC14.3□□□□□ -0.12
H2afb3S4R1G7 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
H2afb3S4R1G7 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
H2afb3S4R1G7 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
H2afb3S4R1G7 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
H2afb3S4R1G7 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC14.3□□□□□ -0.12
H2afb3S4R1G7 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
H2afb3S4R1G7 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
H2afb3S4R1G7 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
H2afb3S4R1G7 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
H2afb3S4R1G7 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
H2afb3S4R1G7 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
H2afb3S4R1G7 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
H2afb3S4R1G7 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
H2afb3S4R1G7 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
H2afb3S4R1G7 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
H2afb3S4R1G7 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
H2afb3S4R1G7 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
H2afb3S4R1G7 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
H2afb3S4R1G7 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
H2afb3S4R1G7 Wnt10b-206ENSMUST00000228546 2709 ntBASIC14.29□□□□□ -0.12
H2afb3S4R1G7 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
H2afb3S4R1G7 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
H2afb3S4R1G7 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
H2afb3S4R1G7 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
H2afb3S4R1G7 Prob1-201ENSMUST00000097619 3021 ntBASIC14.29□□□□□ -0.12
H2afb3S4R1G7 Gm42473-201ENSMUST00000201056 2291 ntBASIC14.29□□□□□ -0.12
H2afb3S4R1G7 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
H2afb3S4R1G7 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
H2afb3S4R1G7 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
H2afb3S4R1G7 Gm11355-201ENSMUST00000121120 306 ntBASIC14.29□□□□□ -0.12
H2afb3S4R1G7 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms