Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cldn9Q9Z0S7 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
Cldn9Q9Z0S7 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cldn9Q9Z0S7 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC15.31■□□□□ 0.04
Cldn9Q9Z0S7 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cldn9Q9Z0S7 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cldn9Q9Z0S7 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cldn9Q9Z0S7 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cldn9Q9Z0S7 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cldn9Q9Z0S7 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Cldn9Q9Z0S7 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cldn9Q9Z0S7 Gm15794-201ENSMUST00000120182 631 ntBASIC15.3■□□□□ 0.04
Cldn9Q9Z0S7 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC15.3■□□□□ 0.04
Cldn9Q9Z0S7 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Cldn9Q9Z0S7 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cldn9Q9Z0S7 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC15.3■□□□□ 0.04
Cldn9Q9Z0S7 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cldn9Q9Z0S7 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cldn9Q9Z0S7 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC15.3■□□□□ 0.04
Cldn9Q9Z0S7 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cldn9Q9Z0S7 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cldn9Q9Z0S7 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cldn9Q9Z0S7 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cldn9Q9Z0S7 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Cldn9Q9Z0S7 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cldn9Q9Z0S7 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cldn9Q9Z0S7 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cldn9Q9Z0S7 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cldn9Q9Z0S7 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cldn9Q9Z0S7 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cldn9Q9Z0S7 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cldn9Q9Z0S7 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Cldn9Q9Z0S7 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Cldn9Q9Z0S7 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cldn9Q9Z0S7 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC15.29■□□□□ 0.04
Cldn9Q9Z0S7 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC15.29■□□□□ 0.04
Cldn9Q9Z0S7 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cldn9Q9Z0S7 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cldn9Q9Z0S7 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Cldn9Q9Z0S7 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC15.29■□□□□ 0.04
Cldn9Q9Z0S7 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cldn9Q9Z0S7 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cldn9Q9Z0S7 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cldn9Q9Z0S7 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cldn9Q9Z0S7 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cldn9Q9Z0S7 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cldn9Q9Z0S7 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cldn9Q9Z0S7 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cldn9Q9Z0S7 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Cldn9Q9Z0S7 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC15.28■□□□□ 0.04
Cldn9Q9Z0S7 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cldn9Q9Z0S7 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cldn9Q9Z0S7 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cldn9Q9Z0S7 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Cldn9Q9Z0S7 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cldn9Q9Z0S7 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cldn9Q9Z0S7 AC130713.1-201ENSMUST00000228853 1096 ntBASIC15.28■□□□□ 0.04
Cldn9Q9Z0S7 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cldn9Q9Z0S7 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Cldn9Q9Z0S7 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cldn9Q9Z0S7 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Cldn9Q9Z0S7 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cldn9Q9Z0S7 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cldn9Q9Z0S7 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cldn9Q9Z0S7 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cldn9Q9Z0S7 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cldn9Q9Z0S7 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cldn9Q9Z0S7 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Cldn9Q9Z0S7 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cldn9Q9Z0S7 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cldn9Q9Z0S7 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cldn9Q9Z0S7 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cldn9Q9Z0S7 Ccdc166-201ENSMUST00000182172 2584 ntBASIC15.28■□□□□ 0.04
Cldn9Q9Z0S7 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cldn9Q9Z0S7 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Cldn9Q9Z0S7 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cldn9Q9Z0S7 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC15.27■□□□□ 0.04
Cldn9Q9Z0S7 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cldn9Q9Z0S7 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cldn9Q9Z0S7 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cldn9Q9Z0S7 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cldn9Q9Z0S7 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cldn9Q9Z0S7 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cldn9Q9Z0S7 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC15.27■□□□□ 0.04
Cldn9Q9Z0S7 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cldn9Q9Z0S7 Gm7507-201ENSMUST00000183053 1008 ntBASIC15.27■□□□□ 0.04
Cldn9Q9Z0S7 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cldn9Q9Z0S7 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cldn9Q9Z0S7 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cldn9Q9Z0S7 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC15.27■□□□□ 0.03
Cldn9Q9Z0S7 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
Cldn9Q9Z0S7 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cldn9Q9Z0S7 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Cldn9Q9Z0S7 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cldn9Q9Z0S7 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cldn9Q9Z0S7 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cldn9Q9Z0S7 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cldn9Q9Z0S7 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.03
Cldn9Q9Z0S7 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.03
Cldn9Q9Z0S7 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms