Protein–RNA interactions for Protein: Q9WU84

Ccs, Copper chaperone for superoxide dismutase, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcsQ9WU84 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CcsQ9WU84 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CcsQ9WU84 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CcsQ9WU84 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CcsQ9WU84 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CcsQ9WU84 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CcsQ9WU84 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
CcsQ9WU84 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CcsQ9WU84 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CcsQ9WU84 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CcsQ9WU84 Gm16042-201ENSMUST00000204813 1247 ntBASIC12.39□□□□□ -0.43
CcsQ9WU84 Timm23-208ENSMUST00000226683 750 ntBASIC12.39□□□□□ -0.43
CcsQ9WU84 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CcsQ9WU84 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
CcsQ9WU84 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC12.39□□□□□ -0.43
CcsQ9WU84 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CcsQ9WU84 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
CcsQ9WU84 Gm42901-201ENSMUST00000197735 3171 ntBASIC12.39□□□□□ -0.43
CcsQ9WU84 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CcsQ9WU84 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CcsQ9WU84 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CcsQ9WU84 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CcsQ9WU84 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CcsQ9WU84 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CcsQ9WU84 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CcsQ9WU84 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CcsQ9WU84 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CcsQ9WU84 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CcsQ9WU84 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC12.39□□□□□ -0.43
CcsQ9WU84 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CcsQ9WU84 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CcsQ9WU84 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CcsQ9WU84 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CcsQ9WU84 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC12.38□□□□□ -0.43
CcsQ9WU84 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CcsQ9WU84 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
CcsQ9WU84 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
CcsQ9WU84 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CcsQ9WU84 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
CcsQ9WU84 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CcsQ9WU84 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CcsQ9WU84 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
CcsQ9WU84 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
CcsQ9WU84 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
CcsQ9WU84 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC12.38□□□□□ -0.43
CcsQ9WU84 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CcsQ9WU84 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC12.38□□□□□ -0.43
CcsQ9WU84 Mir7071-201ENSMUST00000184847 69 ntBASIC12.38□□□□□ -0.43
CcsQ9WU84 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CcsQ9WU84 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CcsQ9WU84 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CcsQ9WU84 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
CcsQ9WU84 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
CcsQ9WU84 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC12.38□□□□□ -0.43
CcsQ9WU84 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CcsQ9WU84 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CcsQ9WU84 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
CcsQ9WU84 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC12.38□□□□□ -0.43
CcsQ9WU84 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CcsQ9WU84 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC12.38□□□□□ -0.43
CcsQ9WU84 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CcsQ9WU84 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CcsQ9WU84 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CcsQ9WU84 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CcsQ9WU84 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CcsQ9WU84 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
CcsQ9WU84 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CcsQ9WU84 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
CcsQ9WU84 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC12.37□□□□□ -0.43
CcsQ9WU84 Gm7712-202ENSMUST00000222331 1510 ntBASIC12.37□□□□□ -0.43
CcsQ9WU84 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CcsQ9WU84 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CcsQ9WU84 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CcsQ9WU84 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC12.37□□□□□ -0.43
CcsQ9WU84 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CcsQ9WU84 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
CcsQ9WU84 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CcsQ9WU84 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
CcsQ9WU84 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CcsQ9WU84 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
CcsQ9WU84 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
CcsQ9WU84 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CcsQ9WU84 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
CcsQ9WU84 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC12.37□□□□□ -0.43
CcsQ9WU84 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CcsQ9WU84 AC156016.1-201ENSMUST00000227190 1035 ntBASIC12.37□□□□□ -0.43
CcsQ9WU84 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
CcsQ9WU84 Gm43272-201ENSMUST00000200599 1584 ntBASIC12.37□□□□□ -0.43
CcsQ9WU84 Gm45760-201ENSMUST00000212190 1782 ntBASIC12.37□□□□□ -0.43
CcsQ9WU84 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CcsQ9WU84 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CcsQ9WU84 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
CcsQ9WU84 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
CcsQ9WU84 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
CcsQ9WU84 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CcsQ9WU84 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CcsQ9WU84 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CcsQ9WU84 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CcsQ9WU84 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC12.37□□□□□ -0.43
CcsQ9WU84 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms