Protein–RNA interactions for Protein: Q9WU28

Pfdn5, Prefoldin subunit 5, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn5Q9WU28 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Pfdn5Q9WU28 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC13.08□□□□□ -0.31
Pfdn5Q9WU28 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.31
Pfdn5Q9WU28 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
Pfdn5Q9WU28 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Pfdn5Q9WU28 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Pfdn5Q9WU28 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Pfdn5Q9WU28 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pfdn5Q9WU28 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pfdn5Q9WU28 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pfdn5Q9WU28 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pfdn5Q9WU28 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
Pfdn5Q9WU28 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC13.08□□□□□ -0.32
Pfdn5Q9WU28 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Pfdn5Q9WU28 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Pfdn5Q9WU28 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pfdn5Q9WU28 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pfdn5Q9WU28 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pfdn5Q9WU28 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC13.08□□□□□ -0.32
Pfdn5Q9WU28 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
Pfdn5Q9WU28 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pfdn5Q9WU28 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pfdn5Q9WU28 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pfdn5Q9WU28 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pfdn5Q9WU28 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pfdn5Q9WU28 Gm43072-201ENSMUST00000200283 1671 ntBASIC13.08□□□□□ -0.32
Pfdn5Q9WU28 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pfdn5Q9WU28 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pfdn5Q9WU28 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC13.08□□□□□ -0.32
Pfdn5Q9WU28 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pfdn5Q9WU28 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pfdn5Q9WU28 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pfdn5Q9WU28 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pfdn5Q9WU28 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pfdn5Q9WU28 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pfdn5Q9WU28 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pfdn5Q9WU28 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Pfdn5Q9WU28 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pfdn5Q9WU28 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pfdn5Q9WU28 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pfdn5Q9WU28 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC13.07□□□□□ -0.32
Pfdn5Q9WU28 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pfdn5Q9WU28 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Pfdn5Q9WU28 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Pfdn5Q9WU28 Gm12896-201ENSMUST00000118430 226 ntBASIC13.07□□□□□ -0.32
Pfdn5Q9WU28 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Pfdn5Q9WU28 Gm9694-201ENSMUST00000193347 1189 ntBASIC13.07□□□□□ -0.32
Pfdn5Q9WU28 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pfdn5Q9WU28 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pfdn5Q9WU28 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pfdn5Q9WU28 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pfdn5Q9WU28 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Pfdn5Q9WU28 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Pfdn5Q9WU28 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pfdn5Q9WU28 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Pfdn5Q9WU28 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC13.07□□□□□ -0.32
Pfdn5Q9WU28 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pfdn5Q9WU28 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pfdn5Q9WU28 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pfdn5Q9WU28 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Pfdn5Q9WU28 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pfdn5Q9WU28 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pfdn5Q9WU28 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Pfdn5Q9WU28 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pfdn5Q9WU28 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pfdn5Q9WU28 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pfdn5Q9WU28 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pfdn5Q9WU28 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Pfdn5Q9WU28 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pfdn5Q9WU28 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC13.06□□□□□ -0.32
Pfdn5Q9WU28 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Pfdn5Q9WU28 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pfdn5Q9WU28 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pfdn5Q9WU28 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pfdn5Q9WU28 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pfdn5Q9WU28 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pfdn5Q9WU28 Gm11249-201ENSMUST00000117071 859 ntBASIC13.06□□□□□ -0.32
Pfdn5Q9WU28 Gm10517-202ENSMUST00000192970 758 ntBASIC13.06□□□□□ -0.32
Pfdn5Q9WU28 Gm42545-201ENSMUST00000202755 922 ntBASIC13.06□□□□□ -0.32
Pfdn5Q9WU28 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC13.06□□□□□ -0.32
Pfdn5Q9WU28 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pfdn5Q9WU28 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pfdn5Q9WU28 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pfdn5Q9WU28 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pfdn5Q9WU28 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC13.06□□□□□ -0.32
Pfdn5Q9WU28 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pfdn5Q9WU28 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pfdn5Q9WU28 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pfdn5Q9WU28 Asic1-205ENSMUST00000228185 1818 ntBASIC13.06□□□□□ -0.32
Pfdn5Q9WU28 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC13.06□□□□□ -0.32
Pfdn5Q9WU28 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pfdn5Q9WU28 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pfdn5Q9WU28 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pfdn5Q9WU28 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pfdn5Q9WU28 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pfdn5Q9WU28 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
Pfdn5Q9WU28 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pfdn5Q9WU28 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pfdn5Q9WU28 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pfdn5Q9WU28 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms