Protein–RNA interactions for Protein: Q9QXN0

Shroom3, Protein Shroom3, mousemouse

Predictions only

Length 1,986 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3Q9QXN0 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Shroom3Q9QXN0 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Shroom3Q9QXN0 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Shroom3Q9QXN0 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Shroom3Q9QXN0 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Shroom3Q9QXN0 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Shroom3Q9QXN0 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Shroom3Q9QXN0 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Shroom3Q9QXN0 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Shroom3Q9QXN0 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Shroom3Q9QXN0 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Shroom3Q9QXN0 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC15.89■□□□□ 0.14
Shroom3Q9QXN0 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.14
Shroom3Q9QXN0 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Shroom3Q9QXN0 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Shroom3Q9QXN0 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC15.89■□□□□ 0.13
Shroom3Q9QXN0 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC15.89■□□□□ 0.13
Shroom3Q9QXN0 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC15.89■□□□□ 0.13
Shroom3Q9QXN0 Gm43073-201ENSMUST00000198200 1189 ntBASIC15.89■□□□□ 0.13
Shroom3Q9QXN0 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Shroom3Q9QXN0 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Shroom3Q9QXN0 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Shroom3Q9QXN0 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Shroom3Q9QXN0 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Shroom3Q9QXN0 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Shroom3Q9QXN0 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Shroom3Q9QXN0 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC15.89■□□□□ 0.13
Shroom3Q9QXN0 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC15.89■□□□□ 0.13
Shroom3Q9QXN0 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
Shroom3Q9QXN0 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Shroom3Q9QXN0 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Shroom3Q9QXN0 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Shroom3Q9QXN0 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Shroom3Q9QXN0 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Shroom3Q9QXN0 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Shroom3Q9QXN0 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Shroom3Q9QXN0 Gm37935-201ENSMUST00000192012 982 ntBASIC15.89■□□□□ 0.13
Shroom3Q9QXN0 Gm13830-205ENSMUST00000201195 1155 ntBASIC15.89■□□□□ 0.13
Shroom3Q9QXN0 Gm6296-201ENSMUST00000222599 943 ntBASIC15.89■□□□□ 0.13
Shroom3Q9QXN0 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Shroom3Q9QXN0 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Shroom3Q9QXN0 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC15.89■□□□□ 0.13
Shroom3Q9QXN0 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Shroom3Q9QXN0 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Shroom3Q9QXN0 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Shroom3Q9QXN0 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Shroom3Q9QXN0 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Shroom3Q9QXN0 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Shroom3Q9QXN0 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC15.88■□□□□ 0.13
Shroom3Q9QXN0 Gm42918-201ENSMUST00000199249 1580 ntBASIC15.88■□□□□ 0.13
Shroom3Q9QXN0 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Shroom3Q9QXN0 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Shroom3Q9QXN0 Gm1401-201ENSMUST00000122048 772 ntBASIC15.88■□□□□ 0.13
Shroom3Q9QXN0 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC15.88■□□□□ 0.13
Shroom3Q9QXN0 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Shroom3Q9QXN0 Gm9172-201ENSMUST00000212092 954 ntBASIC15.88■□□□□ 0.13
Shroom3Q9QXN0 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Shroom3Q9QXN0 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Shroom3Q9QXN0 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Shroom3Q9QXN0 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Shroom3Q9QXN0 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Shroom3Q9QXN0 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Shroom3Q9QXN0 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Shroom3Q9QXN0 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Shroom3Q9QXN0 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Shroom3Q9QXN0 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Shroom3Q9QXN0 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Shroom3Q9QXN0 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
Shroom3Q9QXN0 Gm15165-201ENSMUST00000118140 502 ntBASIC15.87■□□□□ 0.13
Shroom3Q9QXN0 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Shroom3Q9QXN0 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC15.87■□□□□ 0.13
Shroom3Q9QXN0 Gm10060-201ENSMUST00000212002 111 ntBASIC15.87■□□□□ 0.13
Shroom3Q9QXN0 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Shroom3Q9QXN0 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Shroom3Q9QXN0 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Shroom3Q9QXN0 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Shroom3Q9QXN0 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Shroom3Q9QXN0 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC15.87■□□□□ 0.13
Shroom3Q9QXN0 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Shroom3Q9QXN0 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Shroom3Q9QXN0 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Shroom3Q9QXN0 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Shroom3Q9QXN0 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Shroom3Q9QXN0 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Shroom3Q9QXN0 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC15.87■□□□□ 0.13
Shroom3Q9QXN0 Gm12350-201ENSMUST00000121208 462 ntBASIC15.87■□□□□ 0.13
Shroom3Q9QXN0 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC15.87■□□□□ 0.13
Shroom3Q9QXN0 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Shroom3Q9QXN0 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Shroom3Q9QXN0 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
Shroom3Q9QXN0 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Shroom3Q9QXN0 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Shroom3Q9QXN0 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Shroom3Q9QXN0 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Shroom3Q9QXN0 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Shroom3Q9QXN0 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Shroom3Q9QXN0 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Shroom3Q9QXN0 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC15.86■□□□□ 0.13
Shroom3Q9QXN0 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Shroom3Q9QXN0 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC15.86■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms