Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trem1Q9JKE2 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trem1Q9JKE2 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trem1Q9JKE2 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trem1Q9JKE2 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trem1Q9JKE2 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trem1Q9JKE2 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trem1Q9JKE2 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trem1Q9JKE2 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC14.3□□□□□ -0.12
Trem1Q9JKE2 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC14.3□□□□□ -0.12
Trem1Q9JKE2 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC14.3□□□□□ -0.12
Trem1Q9JKE2 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trem1Q9JKE2 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trem1Q9JKE2 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trem1Q9JKE2 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trem1Q9JKE2 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trem1Q9JKE2 Gm27528-202ENSMUST00000222916 2012 ntBASIC14.3□□□□□ -0.12
Trem1Q9JKE2 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trem1Q9JKE2 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Trem1Q9JKE2 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trem1Q9JKE2 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Trem1Q9JKE2 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC14.3□□□□□ -0.12
Trem1Q9JKE2 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trem1Q9JKE2 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trem1Q9JKE2 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trem1Q9JKE2 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trem1Q9JKE2 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC14.29□□□□□ -0.12
Trem1Q9JKE2 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Trem1Q9JKE2 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trem1Q9JKE2 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trem1Q9JKE2 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trem1Q9JKE2 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Trem1Q9JKE2 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC14.29□□□□□ -0.12
Trem1Q9JKE2 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trem1Q9JKE2 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trem1Q9JKE2 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC14.29□□□□□ -0.12
Trem1Q9JKE2 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trem1Q9JKE2 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trem1Q9JKE2 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trem1Q9JKE2 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trem1Q9JKE2 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trem1Q9JKE2 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trem1Q9JKE2 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC14.29□□□□□ -0.12
Trem1Q9JKE2 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trem1Q9JKE2 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC14.29□□□□□ -0.12
Trem1Q9JKE2 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trem1Q9JKE2 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trem1Q9JKE2 Mtag2-201ENSMUST00000058665 714 ntBASIC14.29□□□□□ -0.12
Trem1Q9JKE2 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trem1Q9JKE2 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trem1Q9JKE2 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trem1Q9JKE2 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC14.29□□□□□ -0.12
Trem1Q9JKE2 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Trem1Q9JKE2 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trem1Q9JKE2 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trem1Q9JKE2 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
Trem1Q9JKE2 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
Trem1Q9JKE2 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Trem1Q9JKE2 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trem1Q9JKE2 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trem1Q9JKE2 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trem1Q9JKE2 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trem1Q9JKE2 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trem1Q9JKE2 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trem1Q9JKE2 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trem1Q9JKE2 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trem1Q9JKE2 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trem1Q9JKE2 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trem1Q9JKE2 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trem1Q9JKE2 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trem1Q9JKE2 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trem1Q9JKE2 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trem1Q9JKE2 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trem1Q9JKE2 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Trem1Q9JKE2 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trem1Q9JKE2 Gm13034-201ENSMUST00000121342 3177 ntBASIC14.28□□□□□ -0.12
Trem1Q9JKE2 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trem1Q9JKE2 Gm42642-201ENSMUST00000200683 355 ntBASIC14.28□□□□□ -0.12
Trem1Q9JKE2 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC14.28□□□□□ -0.12
Trem1Q9JKE2 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Trem1Q9JKE2 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trem1Q9JKE2 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trem1Q9JKE2 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trem1Q9JKE2 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trem1Q9JKE2 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
Trem1Q9JKE2 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trem1Q9JKE2 AC153366.2-201ENSMUST00000219461 1984 ntBASIC14.27□□□□□ -0.12
Trem1Q9JKE2 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trem1Q9JKE2 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trem1Q9JKE2 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trem1Q9JKE2 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trem1Q9JKE2 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trem1Q9JKE2 Gm7712-202ENSMUST00000222331 1510 ntBASIC14.27□□□□□ -0.12
Trem1Q9JKE2 Ankra2-208ENSMUST00000226100 1476 ntBASIC14.27□□□□□ -0.12
Trem1Q9JKE2 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trem1Q9JKE2 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC14.27□□□□□ -0.12
Trem1Q9JKE2 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trem1Q9JKE2 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trem1Q9JKE2 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trem1Q9JKE2 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 81.2 ms