Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Scn5aQ9JJV9 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scn5aQ9JJV9 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scn5aQ9JJV9 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scn5aQ9JJV9 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scn5aQ9JJV9 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scn5aQ9JJV9 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC16.32■□□□□ 0.2
Scn5aQ9JJV9 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Scn5aQ9JJV9 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scn5aQ9JJV9 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scn5aQ9JJV9 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC16.32■□□□□ 0.2
Scn5aQ9JJV9 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scn5aQ9JJV9 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scn5aQ9JJV9 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Scn5aQ9JJV9 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scn5aQ9JJV9 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
Scn5aQ9JJV9 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scn5aQ9JJV9 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scn5aQ9JJV9 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Scn5aQ9JJV9 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scn5aQ9JJV9 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Scn5aQ9JJV9 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scn5aQ9JJV9 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Scn5aQ9JJV9 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC16.31■□□□□ 0.2
Scn5aQ9JJV9 AC127302.2-201ENSMUST00000215212 268 ntBASIC16.31■□□□□ 0.2
Scn5aQ9JJV9 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC16.31■□□□□ 0.2
Scn5aQ9JJV9 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Scn5aQ9JJV9 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scn5aQ9JJV9 Gm5898-201ENSMUST00000121016 2071 ntBASIC16.31■□□□□ 0.2
Scn5aQ9JJV9 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scn5aQ9JJV9 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scn5aQ9JJV9 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scn5aQ9JJV9 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Scn5aQ9JJV9 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Scn5aQ9JJV9 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC16.31■□□□□ 0.2
Scn5aQ9JJV9 Gm25948-201ENSMUST00000175334 112 ntBASIC16.31■□□□□ 0.2
Scn5aQ9JJV9 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC16.31■□□□□ 0.2
Scn5aQ9JJV9 Gm5628-201ENSMUST00000222318 1049 ntBASIC16.31■□□□□ 0.2
Scn5aQ9JJV9 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scn5aQ9JJV9 AC115863.1-201ENSMUST00000214815 1813 ntBASIC16.31■□□□□ 0.2
Scn5aQ9JJV9 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Scn5aQ9JJV9 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scn5aQ9JJV9 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scn5aQ9JJV9 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Scn5aQ9JJV9 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Scn5aQ9JJV9 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scn5aQ9JJV9 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scn5aQ9JJV9 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scn5aQ9JJV9 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scn5aQ9JJV9 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scn5aQ9JJV9 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC16.3■□□□□ 0.2
Scn5aQ9JJV9 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC16.3■□□□□ 0.2
Scn5aQ9JJV9 Rprl2-201ENSMUST00000157150 290 ntBASIC16.3■□□□□ 0.2
Scn5aQ9JJV9 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC16.3■□□□□ 0.2
Scn5aQ9JJV9 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Scn5aQ9JJV9 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scn5aQ9JJV9 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scn5aQ9JJV9 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scn5aQ9JJV9 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scn5aQ9JJV9 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scn5aQ9JJV9 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
Scn5aQ9JJV9 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scn5aQ9JJV9 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scn5aQ9JJV9 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Scn5aQ9JJV9 Gm14057-201ENSMUST00000120631 482 ntBASIC16.29■□□□□ 0.2
Scn5aQ9JJV9 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC16.29■□□□□ 0.2
Scn5aQ9JJV9 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scn5aQ9JJV9 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scn5aQ9JJV9 Gpr146-202ENSMUST00000053120 1040 ntBASIC16.29■□□□□ 0.2
Scn5aQ9JJV9 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Scn5aQ9JJV9 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC16.29■□□□□ 0.2
Scn5aQ9JJV9 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scn5aQ9JJV9 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Scn5aQ9JJV9 Rbfox2-206ENSMUST00000227314 1810 ntBASIC16.29■□□□□ 0.2
Scn5aQ9JJV9 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scn5aQ9JJV9 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Scn5aQ9JJV9 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scn5aQ9JJV9 Gm19439-201ENSMUST00000198195 2273 ntBASIC16.29■□□□□ 0.2
Scn5aQ9JJV9 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
Scn5aQ9JJV9 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scn5aQ9JJV9 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scn5aQ9JJV9 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Scn5aQ9JJV9 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scn5aQ9JJV9 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scn5aQ9JJV9 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scn5aQ9JJV9 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC16.29■□□□□ 0.2
Scn5aQ9JJV9 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scn5aQ9JJV9 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
Scn5aQ9JJV9 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Scn5aQ9JJV9 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scn5aQ9JJV9 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Scn5aQ9JJV9 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC16.28■□□□□ 0.2
Scn5aQ9JJV9 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Scn5aQ9JJV9 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Scn5aQ9JJV9 Gm13216-201ENSMUST00000117145 591 ntBASIC16.28■□□□□ 0.2
Scn5aQ9JJV9 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
Scn5aQ9JJV9 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Scn5aQ9JJV9 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC16.28■□□□□ 0.2
Scn5aQ9JJV9 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Scn5aQ9JJV9 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms