Protein–RNA interactions for Protein: Q9JHS4

Clpx, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, mousemouse

Known RBP Predictions only

Length 634 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpxQ9JHS4 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ClpxQ9JHS4 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ClpxQ9JHS4 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ClpxQ9JHS4 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ClpxQ9JHS4 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ClpxQ9JHS4 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC14.58□□□□□ -0.08
ClpxQ9JHS4 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ClpxQ9JHS4 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
ClpxQ9JHS4 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC14.58□□□□□ -0.08
ClpxQ9JHS4 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ClpxQ9JHS4 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
ClpxQ9JHS4 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ClpxQ9JHS4 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
ClpxQ9JHS4 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ClpxQ9JHS4 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ClpxQ9JHS4 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC14.58□□□□□ -0.08
ClpxQ9JHS4 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ClpxQ9JHS4 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
ClpxQ9JHS4 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
ClpxQ9JHS4 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ClpxQ9JHS4 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
ClpxQ9JHS4 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ClpxQ9JHS4 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
ClpxQ9JHS4 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
ClpxQ9JHS4 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC14.57□□□□□ -0.08
ClpxQ9JHS4 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ClpxQ9JHS4 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ClpxQ9JHS4 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC14.57□□□□□ -0.08
ClpxQ9JHS4 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ClpxQ9JHS4 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ClpxQ9JHS4 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ClpxQ9JHS4 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ClpxQ9JHS4 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ClpxQ9JHS4 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
ClpxQ9JHS4 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC14.57□□□□□ -0.08
ClpxQ9JHS4 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
ClpxQ9JHS4 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ClpxQ9JHS4 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ClpxQ9JHS4 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC14.57□□□□□ -0.08
ClpxQ9JHS4 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ClpxQ9JHS4 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ClpxQ9JHS4 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
ClpxQ9JHS4 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ClpxQ9JHS4 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ClpxQ9JHS4 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ClpxQ9JHS4 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ClpxQ9JHS4 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
ClpxQ9JHS4 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ClpxQ9JHS4 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
ClpxQ9JHS4 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
ClpxQ9JHS4 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
ClpxQ9JHS4 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ClpxQ9JHS4 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
ClpxQ9JHS4 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
ClpxQ9JHS4 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ClpxQ9JHS4 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC14.56□□□□□ -0.08
ClpxQ9JHS4 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
ClpxQ9JHS4 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
ClpxQ9JHS4 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
ClpxQ9JHS4 Mir5130-201ENSMUST00000175160 84 ntBASIC14.56□□□□□ -0.08
ClpxQ9JHS4 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
ClpxQ9JHS4 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC14.56□□□□□ -0.08
ClpxQ9JHS4 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
ClpxQ9JHS4 AC120002.2-201ENSMUST00000220205 773 ntBASIC14.56□□□□□ -0.08
ClpxQ9JHS4 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC14.56□□□□□ -0.08
ClpxQ9JHS4 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ClpxQ9JHS4 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ClpxQ9JHS4 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ClpxQ9JHS4 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ClpxQ9JHS4 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
ClpxQ9JHS4 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ClpxQ9JHS4 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
ClpxQ9JHS4 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ClpxQ9JHS4 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
ClpxQ9JHS4 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ClpxQ9JHS4 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
ClpxQ9JHS4 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
ClpxQ9JHS4 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
ClpxQ9JHS4 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ClpxQ9JHS4 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
ClpxQ9JHS4 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ClpxQ9JHS4 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
ClpxQ9JHS4 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ClpxQ9JHS4 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ClpxQ9JHS4 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC14.55□□□□□ -0.08
ClpxQ9JHS4 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
ClpxQ9JHS4 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC14.55□□□□□ -0.08
ClpxQ9JHS4 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
ClpxQ9JHS4 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ClpxQ9JHS4 Gm13474-201ENSMUST00000122466 815 ntBASIC14.55□□□□□ -0.08
ClpxQ9JHS4 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
ClpxQ9JHS4 Gm18958-201ENSMUST00000174258 762 ntBASIC14.55□□□□□ -0.08
ClpxQ9JHS4 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ClpxQ9JHS4 Il3ra-202ENSMUST00000223589 738 ntBASIC14.55□□□□□ -0.08
ClpxQ9JHS4 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ClpxQ9JHS4 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ClpxQ9JHS4 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
ClpxQ9JHS4 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
ClpxQ9JHS4 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ClpxQ9JHS4 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms