Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC18.85■□□□□ 0.61
Ube3bQ9ES34 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ube3bQ9ES34 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ube3bQ9ES34 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ube3bQ9ES34 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC18.85■□□□□ 0.61
Ube3bQ9ES34 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ube3bQ9ES34 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Ube3bQ9ES34 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ube3bQ9ES34 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ube3bQ9ES34 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ube3bQ9ES34 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ube3bQ9ES34 Gm13036-201ENSMUST00000117799 748 ntBASIC18.85■□□□□ 0.61
Ube3bQ9ES34 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ube3bQ9ES34 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC18.85■□□□□ 0.61
Ube3bQ9ES34 Gm5682-201ENSMUST00000173402 505 ntBASIC18.85■□□□□ 0.61
Ube3bQ9ES34 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ube3bQ9ES34 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC18.85■□□□□ 0.61
Ube3bQ9ES34 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ube3bQ9ES34 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ube3bQ9ES34 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ube3bQ9ES34 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ube3bQ9ES34 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ube3bQ9ES34 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ube3bQ9ES34 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ube3bQ9ES34 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ube3bQ9ES34 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ube3bQ9ES34 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
Ube3bQ9ES34 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ube3bQ9ES34 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Ube3bQ9ES34 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Ube3bQ9ES34 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ube3bQ9ES34 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ube3bQ9ES34 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ube3bQ9ES34 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Ube3bQ9ES34 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC18.84■□□□□ 0.61
Ube3bQ9ES34 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC18.84■□□□□ 0.61
Ube3bQ9ES34 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ube3bQ9ES34 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Ube3bQ9ES34 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ube3bQ9ES34 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ube3bQ9ES34 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ube3bQ9ES34 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Ube3bQ9ES34 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ube3bQ9ES34 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ube3bQ9ES34 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC18.83■□□□□ 0.61
Ube3bQ9ES34 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ube3bQ9ES34 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ube3bQ9ES34 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Ube3bQ9ES34 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ube3bQ9ES34 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ube3bQ9ES34 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC18.83■□□□□ 0.61
Ube3bQ9ES34 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC18.83■□□□□ 0.6
Ube3bQ9ES34 Gm43514-201ENSMUST00000198852 424 ntBASIC18.83■□□□□ 0.6
Ube3bQ9ES34 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ube3bQ9ES34 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ube3bQ9ES34 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ube3bQ9ES34 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC18.83■□□□□ 0.6
Ube3bQ9ES34 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ube3bQ9ES34 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Ube3bQ9ES34 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC18.83■□□□□ 0.6
Ube3bQ9ES34 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ube3bQ9ES34 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Ube3bQ9ES34 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ube3bQ9ES34 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ube3bQ9ES34 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ube3bQ9ES34 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ube3bQ9ES34 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ube3bQ9ES34 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Ube3bQ9ES34 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ube3bQ9ES34 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ube3bQ9ES34 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ube3bQ9ES34 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ube3bQ9ES34 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ube3bQ9ES34 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ube3bQ9ES34 Gm11764-201ENSMUST00000120221 623 ntBASIC18.82■□□□□ 0.6
Ube3bQ9ES34 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC18.82■□□□□ 0.6
Ube3bQ9ES34 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Ube3bQ9ES34 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC18.82■□□□□ 0.6
Ube3bQ9ES34 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ube3bQ9ES34 Gm20628-201ENSMUST00000177363 3215 ntBASIC18.82■□□□□ 0.6
Ube3bQ9ES34 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ube3bQ9ES34 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC18.82■□□□□ 0.6
Ube3bQ9ES34 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ube3bQ9ES34 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ube3bQ9ES34 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ube3bQ9ES34 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ube3bQ9ES34 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Ube3bQ9ES34 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Ube3bQ9ES34 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ube3bQ9ES34 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ube3bQ9ES34 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ube3bQ9ES34 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ube3bQ9ES34 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ube3bQ9ES34 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Ube3bQ9ES34 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC18.81■□□□□ 0.6
Ube3bQ9ES34 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ube3bQ9ES34 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ube3bQ9ES34 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC18.81■□□□□ 0.6
Ube3bQ9ES34 Gm27628-201ENSMUST00000184911 107 ntBASIC18.81■□□□□ 0.6
Ube3bQ9ES34 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms