Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC16.26■□□□□ 0.19
Nkx2-4Q9EQM3 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC16.26■□□□□ 0.19
Nkx2-4Q9EQM3 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nkx2-4Q9EQM3 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nkx2-4Q9EQM3 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nkx2-4Q9EQM3 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Nkx2-4Q9EQM3 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Nkx2-4Q9EQM3 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nkx2-4Q9EQM3 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nkx2-4Q9EQM3 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nkx2-4Q9EQM3 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Nkx2-4Q9EQM3 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nkx2-4Q9EQM3 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nkx2-4Q9EQM3 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nkx2-4Q9EQM3 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Nkx2-4Q9EQM3 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nkx2-4Q9EQM3 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC16.25■□□□□ 0.19
Nkx2-4Q9EQM3 CT025626.1-201ENSMUST00000223735 1455 ntBASIC16.25■□□□□ 0.19
Nkx2-4Q9EQM3 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
Nkx2-4Q9EQM3 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC16.25■□□□□ 0.19
Nkx2-4Q9EQM3 Gm5866-201ENSMUST00000177881 973 ntBASIC16.25■□□□□ 0.19
Nkx2-4Q9EQM3 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Nkx2-4Q9EQM3 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Nkx2-4Q9EQM3 Gm43767-201ENSMUST00000198933 381 ntBASIC16.25■□□□□ 0.19
Nkx2-4Q9EQM3 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC16.25■□□□□ 0.19
Nkx2-4Q9EQM3 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Nkx2-4Q9EQM3 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nkx2-4Q9EQM3 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC16.25■□□□□ 0.19
Nkx2-4Q9EQM3 AC126250.1-201ENSMUST00000228343 1768 ntBASIC16.25■□□□□ 0.19
Nkx2-4Q9EQM3 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nkx2-4Q9EQM3 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Nkx2-4Q9EQM3 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Nkx2-4Q9EQM3 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nkx2-4Q9EQM3 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Nkx2-4Q9EQM3 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nkx2-4Q9EQM3 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC16.25■□□□□ 0.19
Nkx2-4Q9EQM3 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Nkx2-4Q9EQM3 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC16.24■□□□□ 0.19
Nkx2-4Q9EQM3 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nkx2-4Q9EQM3 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC16.24■□□□□ 0.19
Nkx2-4Q9EQM3 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Nkx2-4Q9EQM3 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC16.24■□□□□ 0.19
Nkx2-4Q9EQM3 AC159621.2-201ENSMUST00000223519 1326 ntBASIC16.24■□□□□ 0.19
Nkx2-4Q9EQM3 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nkx2-4Q9EQM3 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Nkx2-4Q9EQM3 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nkx2-4Q9EQM3 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Nkx2-4Q9EQM3 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Nkx2-4Q9EQM3 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC16.24■□□□□ 0.19
Nkx2-4Q9EQM3 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Nkx2-4Q9EQM3 Hist1h2al-201ENSMUST00000091708 339 ntBASIC16.24■□□□□ 0.19
Nkx2-4Q9EQM3 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nkx2-4Q9EQM3 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nkx2-4Q9EQM3 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Nkx2-4Q9EQM3 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC16.24■□□□□ 0.19
Nkx2-4Q9EQM3 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nkx2-4Q9EQM3 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nkx2-4Q9EQM3 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nkx2-4Q9EQM3 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nkx2-4Q9EQM3 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nkx2-4Q9EQM3 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nkx2-4Q9EQM3 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Nkx2-4Q9EQM3 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nkx2-4Q9EQM3 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Nkx2-4Q9EQM3 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC16.23■□□□□ 0.19
Nkx2-4Q9EQM3 Gm10253-201ENSMUST00000194270 940 ntBASIC16.23■□□□□ 0.19
Nkx2-4Q9EQM3 Gm19164-201ENSMUST00000210667 640 ntBASIC16.23■□□□□ 0.19
Nkx2-4Q9EQM3 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC16.23■□□□□ 0.19
Nkx2-4Q9EQM3 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nkx2-4Q9EQM3 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Nkx2-4Q9EQM3 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Nkx2-4Q9EQM3 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nkx2-4Q9EQM3 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Nkx2-4Q9EQM3 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nkx2-4Q9EQM3 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Nkx2-4Q9EQM3 Gm6018-201ENSMUST00000216090 1306 ntBASIC16.22■□□□□ 0.19
Nkx2-4Q9EQM3 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nkx2-4Q9EQM3 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
Nkx2-4Q9EQM3 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nkx2-4Q9EQM3 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC16.22■□□□□ 0.19
Nkx2-4Q9EQM3 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC16.22■□□□□ 0.19
Nkx2-4Q9EQM3 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC16.22■□□□□ 0.19
Nkx2-4Q9EQM3 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Nkx2-4Q9EQM3 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC16.22■□□□□ 0.19
Nkx2-4Q9EQM3 Gm24158-201ENSMUST00000175263 71 ntBASIC16.22■□□□□ 0.19
Nkx2-4Q9EQM3 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Nkx2-4Q9EQM3 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Nkx2-4Q9EQM3 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nkx2-4Q9EQM3 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nkx2-4Q9EQM3 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nkx2-4Q9EQM3 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nkx2-4Q9EQM3 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nkx2-4Q9EQM3 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nkx2-4Q9EQM3 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC16.22■□□□□ 0.19
Nkx2-4Q9EQM3 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC16.22■□□□□ 0.19
Nkx2-4Q9EQM3 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nkx2-4Q9EQM3 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nkx2-4Q9EQM3 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nkx2-4Q9EQM3 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nkx2-4Q9EQM3 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms