Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Upf1Q9EPU0 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Upf1Q9EPU0 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Upf1Q9EPU0 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Upf1Q9EPU0 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Upf1Q9EPU0 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Upf1Q9EPU0 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Upf1Q9EPU0 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Upf1Q9EPU0 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC17.94■□□□□ 0.46
Upf1Q9EPU0 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC17.94■□□□□ 0.46
Upf1Q9EPU0 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Upf1Q9EPU0 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Upf1Q9EPU0 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Upf1Q9EPU0 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Upf1Q9EPU0 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Upf1Q9EPU0 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Upf1Q9EPU0 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC17.93■□□□□ 0.46
Upf1Q9EPU0 Gm5184-201ENSMUST00000220417 1702 ntBASIC17.93■□□□□ 0.46
Upf1Q9EPU0 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Upf1Q9EPU0 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Upf1Q9EPU0 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Upf1Q9EPU0 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Upf1Q9EPU0 Gm4204-201ENSMUST00000110798 1231 ntBASIC17.93■□□□□ 0.46
Upf1Q9EPU0 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Upf1Q9EPU0 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC17.93■□□□□ 0.46
Upf1Q9EPU0 Gm18766-201ENSMUST00000189811 808 ntBASIC17.93■□□□□ 0.46
Upf1Q9EPU0 Gm45195-201ENSMUST00000205597 1008 ntBASIC17.93■□□□□ 0.46
Upf1Q9EPU0 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Upf1Q9EPU0 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Upf1Q9EPU0 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Upf1Q9EPU0 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Upf1Q9EPU0 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Upf1Q9EPU0 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Upf1Q9EPU0 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Upf1Q9EPU0 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Upf1Q9EPU0 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Upf1Q9EPU0 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Upf1Q9EPU0 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Upf1Q9EPU0 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Upf1Q9EPU0 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Upf1Q9EPU0 AC025913.2-201ENSMUST00000220136 1766 ntBASIC17.92■□□□□ 0.46
Upf1Q9EPU0 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Upf1Q9EPU0 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Upf1Q9EPU0 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Upf1Q9EPU0 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Upf1Q9EPU0 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC17.92■□□□□ 0.46
Upf1Q9EPU0 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Upf1Q9EPU0 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Upf1Q9EPU0 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC17.92■□□□□ 0.46
Upf1Q9EPU0 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Upf1Q9EPU0 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Upf1Q9EPU0 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Upf1Q9EPU0 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Upf1Q9EPU0 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Upf1Q9EPU0 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Upf1Q9EPU0 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Upf1Q9EPU0 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Upf1Q9EPU0 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Upf1Q9EPU0 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.91■□□□□ 0.46
Upf1Q9EPU0 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Upf1Q9EPU0 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Upf1Q9EPU0 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Upf1Q9EPU0 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
Upf1Q9EPU0 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Upf1Q9EPU0 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Upf1Q9EPU0 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
Upf1Q9EPU0 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
Upf1Q9EPU0 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC17.91■□□□□ 0.46
Upf1Q9EPU0 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Upf1Q9EPU0 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Upf1Q9EPU0 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Upf1Q9EPU0 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Upf1Q9EPU0 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC17.9■□□□□ 0.46
Upf1Q9EPU0 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Upf1Q9EPU0 Iqck-206ENSMUST00000208658 2891 ntBASIC17.9■□□□□ 0.46
Upf1Q9EPU0 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.9■□□□□ 0.46
Upf1Q9EPU0 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Upf1Q9EPU0 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Upf1Q9EPU0 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Upf1Q9EPU0 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Upf1Q9EPU0 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Upf1Q9EPU0 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Upf1Q9EPU0 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC17.9■□□□□ 0.46
Upf1Q9EPU0 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Upf1Q9EPU0 Gm27892-201ENSMUST00000185017 106 ntBASIC17.9■□□□□ 0.46
Upf1Q9EPU0 Gm42612-201ENSMUST00000197986 623 ntBASIC17.9■□□□□ 0.46
Upf1Q9EPU0 Gm43170-201ENSMUST00000199827 612 ntBASIC17.9■□□□□ 0.46
Upf1Q9EPU0 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Upf1Q9EPU0 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Upf1Q9EPU0 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Upf1Q9EPU0 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.46
Upf1Q9EPU0 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.46
Upf1Q9EPU0 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Upf1Q9EPU0 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Upf1Q9EPU0 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Upf1Q9EPU0 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Upf1Q9EPU0 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Upf1Q9EPU0 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
Upf1Q9EPU0 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
Upf1Q9EPU0 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC17.89■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms