Protein–RNA interactions for Protein: Q9DBU3

Riok3, Serine/threonine-protein kinase RIO3, mousemouse

Known RBP Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Riok3Q9DBU3 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Riok3Q9DBU3 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Riok3Q9DBU3 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.44■□□□□ 0.38
Riok3Q9DBU3 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Riok3Q9DBU3 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Riok3Q9DBU3 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC17.44■□□□□ 0.38
Riok3Q9DBU3 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Riok3Q9DBU3 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC17.44■□□□□ 0.38
Riok3Q9DBU3 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Riok3Q9DBU3 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Riok3Q9DBU3 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Riok3Q9DBU3 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Riok3Q9DBU3 Gm13844-201ENSMUST00000134541 581 ntTSL 3 BASIC17.44■□□□□ 0.38
Riok3Q9DBU3 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC17.44■□□□□ 0.38
Riok3Q9DBU3 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Riok3Q9DBU3 Prl5a1-201ENSMUST00000017208 1061 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Riok3Q9DBU3 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC17.44■□□□□ 0.38
Riok3Q9DBU3 Gm43811-201ENSMUST00000202862 695 ntBASIC17.44■□□□□ 0.38
Riok3Q9DBU3 Il3ra-202ENSMUST00000223589 738 ntBASIC17.44■□□□□ 0.38
Riok3Q9DBU3 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Riok3Q9DBU3 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Riok3Q9DBU3 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Riok3Q9DBU3 Gm29245-201ENSMUST00000187332 1416 ntBASIC17.44■□□□□ 0.38
Riok3Q9DBU3 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Riok3Q9DBU3 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Riok3Q9DBU3 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Riok3Q9DBU3 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Riok3Q9DBU3 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Riok3Q9DBU3 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.44■□□□□ 0.38
Riok3Q9DBU3 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Riok3Q9DBU3 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Riok3Q9DBU3 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Riok3Q9DBU3 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Riok3Q9DBU3 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Riok3Q9DBU3 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Riok3Q9DBU3 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Riok3Q9DBU3 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Riok3Q9DBU3 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC17.43■□□□□ 0.38
Riok3Q9DBU3 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Riok3Q9DBU3 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Riok3Q9DBU3 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Riok3Q9DBU3 Cbx3-ps3-201ENSMUST00000118595 550 ntBASIC17.43■□□□□ 0.38
Riok3Q9DBU3 Gm14426-201ENSMUST00000128562 249 ntTSL 3 BASIC17.43■□□□□ 0.38
Riok3Q9DBU3 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC17.43■□□□□ 0.38
Riok3Q9DBU3 Gm11948-201ENSMUST00000142322 539 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Riok3Q9DBU3 Gm3573-201ENSMUST00000168673 898 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Riok3Q9DBU3 Gm3486-201ENSMUST00000169361 883 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Riok3Q9DBU3 Gm4181-201ENSMUST00000170249 898 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Riok3Q9DBU3 4931440J10Rik-201ENSMUST00000181344 891 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Riok3Q9DBU3 Gm6657-203ENSMUST00000188791 531 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Riok3Q9DBU3 Gm38283-201ENSMUST00000193041 695 ntBASIC17.43■□□□□ 0.38
Riok3Q9DBU3 Gm37355-201ENSMUST00000193345 606 ntBASIC17.43■□□□□ 0.38
Riok3Q9DBU3 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Riok3Q9DBU3 Olfr811-201ENSMUST00000076437 960 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Riok3Q9DBU3 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Riok3Q9DBU3 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Riok3Q9DBU3 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Riok3Q9DBU3 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Riok3Q9DBU3 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Riok3Q9DBU3 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC17.43■□□□□ 0.38
Riok3Q9DBU3 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Riok3Q9DBU3 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Riok3Q9DBU3 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Riok3Q9DBU3 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Riok3Q9DBU3 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC17.43■□□□□ 0.38
Riok3Q9DBU3 Zfp780b-203ENSMUST00000205874 1907 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Riok3Q9DBU3 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Riok3Q9DBU3 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Riok3Q9DBU3 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Riok3Q9DBU3 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Riok3Q9DBU3 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Riok3Q9DBU3 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Riok3Q9DBU3 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Riok3Q9DBU3 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC17.42■□□□□ 0.38
Riok3Q9DBU3 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Riok3Q9DBU3 A330043C09Rik-201ENSMUST00000139823 1009 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Riok3Q9DBU3 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC17.42■□□□□ 0.38
Riok3Q9DBU3 Gm19175-201ENSMUST00000199895 916 ntBASIC17.42■□□□□ 0.38
Riok3Q9DBU3 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC17.42■□□□□ 0.38
Riok3Q9DBU3 Olfr185-ps1-201ENSMUST00000205894 881 ntBASIC17.42■□□□□ 0.38
Riok3Q9DBU3 Gm45401-201ENSMUST00000209456 733 ntBASIC17.42■□□□□ 0.38
Riok3Q9DBU3 AC154515.3-201ENSMUST00000225081 1159 ntBASIC17.42■□□□□ 0.38
Riok3Q9DBU3 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Riok3Q9DBU3 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Riok3Q9DBU3 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC17.42■□□□□ 0.38
Riok3Q9DBU3 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Riok3Q9DBU3 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Riok3Q9DBU3 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Riok3Q9DBU3 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Riok3Q9DBU3 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Riok3Q9DBU3 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Riok3Q9DBU3 Olfr183-202ENSMUST00000206303 1862 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
Riok3Q9DBU3 Gm42736-201ENSMUST00000200723 1353 ntBASIC17.41■□□□□ 0.38
Riok3Q9DBU3 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Riok3Q9DBU3 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Riok3Q9DBU3 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC17.41■□□□□ 0.38
Riok3Q9DBU3 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Riok3Q9DBU3 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
Riok3Q9DBU3 Kcne2-202ENSMUST00000113971 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Riok3Q9DBU3 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms