Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC16.59■□□□□ 0.25
Chmp2aQ9DB34 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC16.59■□□□□ 0.25
Chmp2aQ9DB34 Gm7507-201ENSMUST00000183053 1008 ntBASIC16.59■□□□□ 0.25
Chmp2aQ9DB34 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Chmp2aQ9DB34 Spr-ps1-201ENSMUST00000089584 605 ntBASIC16.59■□□□□ 0.25
Chmp2aQ9DB34 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
Chmp2aQ9DB34 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chmp2aQ9DB34 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC16.59■□□□□ 0.25
Chmp2aQ9DB34 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC16.59■□□□□ 0.25
Chmp2aQ9DB34 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chmp2aQ9DB34 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Chmp2aQ9DB34 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chmp2aQ9DB34 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chmp2aQ9DB34 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chmp2aQ9DB34 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chmp2aQ9DB34 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chmp2aQ9DB34 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Chmp2aQ9DB34 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chmp2aQ9DB34 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chmp2aQ9DB34 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Chmp2aQ9DB34 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.25
Chmp2aQ9DB34 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC16.58■□□□□ 0.25
Chmp2aQ9DB34 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Chmp2aQ9DB34 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Chmp2aQ9DB34 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.25
Chmp2aQ9DB34 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
Chmp2aQ9DB34 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.25
Chmp2aQ9DB34 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chmp2aQ9DB34 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chmp2aQ9DB34 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chmp2aQ9DB34 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chmp2aQ9DB34 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Chmp2aQ9DB34 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC16.58■□□□□ 0.24
Chmp2aQ9DB34 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC16.58■□□□□ 0.24
Chmp2aQ9DB34 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC16.58■□□□□ 0.24
Chmp2aQ9DB34 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC16.58■□□□□ 0.24
Chmp2aQ9DB34 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chmp2aQ9DB34 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chmp2aQ9DB34 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chmp2aQ9DB34 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chmp2aQ9DB34 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Chmp2aQ9DB34 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Chmp2aQ9DB34 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chmp2aQ9DB34 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chmp2aQ9DB34 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chmp2aQ9DB34 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp2aQ9DB34 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp2aQ9DB34 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp2aQ9DB34 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp2aQ9DB34 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp2aQ9DB34 Gm37166-201ENSMUST00000195473 2474 ntBASIC16.57■□□□□ 0.24
Chmp2aQ9DB34 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp2aQ9DB34 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
Chmp2aQ9DB34 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Chmp2aQ9DB34 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp2aQ9DB34 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp2aQ9DB34 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp2aQ9DB34 Gm44454-201ENSMUST00000198541 138 ntBASIC16.57■□□□□ 0.24
Chmp2aQ9DB34 AC153889.1-201ENSMUST00000219257 330 ntBASIC16.57■□□□□ 0.24
Chmp2aQ9DB34 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp2aQ9DB34 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp2aQ9DB34 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp2aQ9DB34 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp2aQ9DB34 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC16.57■□□□□ 0.24
Chmp2aQ9DB34 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp2aQ9DB34 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp2aQ9DB34 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp2aQ9DB34 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp2aQ9DB34 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Chmp2aQ9DB34 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp2aQ9DB34 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp2aQ9DB34 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp2aQ9DB34 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chmp2aQ9DB34 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Chmp2aQ9DB34 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chmp2aQ9DB34 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chmp2aQ9DB34 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC16.56■□□□□ 0.24
Chmp2aQ9DB34 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chmp2aQ9DB34 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Chmp2aQ9DB34 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Chmp2aQ9DB34 Gm15165-201ENSMUST00000118140 502 ntBASIC16.56■□□□□ 0.24
Chmp2aQ9DB34 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC16.56■□□□□ 0.24
Chmp2aQ9DB34 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC16.56■□□□□ 0.24
Chmp2aQ9DB34 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chmp2aQ9DB34 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC16.56■□□□□ 0.24
Chmp2aQ9DB34 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chmp2aQ9DB34 AC108846.1-201ENSMUST00000214531 513 ntBASIC16.56■□□□□ 0.24
Chmp2aQ9DB34 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chmp2aQ9DB34 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chmp2aQ9DB34 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Chmp2aQ9DB34 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Chmp2aQ9DB34 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chmp2aQ9DB34 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Chmp2aQ9DB34 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chmp2aQ9DB34 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chmp2aQ9DB34 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chmp2aQ9DB34 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC16.56■□□□□ 0.24
Chmp2aQ9DB34 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chmp2aQ9DB34 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chmp2aQ9DB34 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 126.1 ms