Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Stag1Q9D3E6 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.62
Stag1Q9D3E6 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.62
Stag1Q9D3E6 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC18.89■□□□□ 0.61
Stag1Q9D3E6 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Stag1Q9D3E6 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Stag1Q9D3E6 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Stag1Q9D3E6 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC18.89■□□□□ 0.61
Stag1Q9D3E6 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC18.89■□□□□ 0.61
Stag1Q9D3E6 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC18.89■□□□□ 0.61
Stag1Q9D3E6 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Stag1Q9D3E6 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC18.89■□□□□ 0.61
Stag1Q9D3E6 Gm45683-201ENSMUST00000210825 1247 ntBASIC18.89■□□□□ 0.61
Stag1Q9D3E6 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Stag1Q9D3E6 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC18.89■□□□□ 0.61
Stag1Q9D3E6 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Stag1Q9D3E6 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Stag1Q9D3E6 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Stag1Q9D3E6 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Stag1Q9D3E6 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Stag1Q9D3E6 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Stag1Q9D3E6 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Stag1Q9D3E6 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Stag1Q9D3E6 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Stag1Q9D3E6 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Stag1Q9D3E6 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Stag1Q9D3E6 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Stag1Q9D3E6 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC18.88■□□□□ 0.61
Stag1Q9D3E6 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC18.88■□□□□ 0.61
Stag1Q9D3E6 Gm4995-201ENSMUST00000117247 432 ntBASIC18.88■□□□□ 0.61
Stag1Q9D3E6 Gm6736-201ENSMUST00000166583 948 ntBASIC18.88■□□□□ 0.61
Stag1Q9D3E6 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Stag1Q9D3E6 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC18.88■□□□□ 0.61
Stag1Q9D3E6 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Stag1Q9D3E6 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Stag1Q9D3E6 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Stag1Q9D3E6 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Stag1Q9D3E6 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Stag1Q9D3E6 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Stag1Q9D3E6 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Stag1Q9D3E6 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Stag1Q9D3E6 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
Stag1Q9D3E6 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Stag1Q9D3E6 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Stag1Q9D3E6 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Stag1Q9D3E6 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Stag1Q9D3E6 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Stag1Q9D3E6 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Stag1Q9D3E6 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC18.87■□□□□ 0.61
Stag1Q9D3E6 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC18.87■□□□□ 0.61
Stag1Q9D3E6 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC18.87■□□□□ 0.61
Stag1Q9D3E6 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Stag1Q9D3E6 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Stag1Q9D3E6 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Stag1Q9D3E6 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC18.87■□□□□ 0.61
Stag1Q9D3E6 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC18.87■□□□□ 0.61
Stag1Q9D3E6 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Stag1Q9D3E6 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Stag1Q9D3E6 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Stag1Q9D3E6 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Stag1Q9D3E6 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Stag1Q9D3E6 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Stag1Q9D3E6 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Stag1Q9D3E6 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC18.86■□□□□ 0.61
Stag1Q9D3E6 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Stag1Q9D3E6 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC18.86■□□□□ 0.61
Stag1Q9D3E6 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Stag1Q9D3E6 Gm2756-201ENSMUST00000195851 400 ntBASIC18.86■□□□□ 0.61
Stag1Q9D3E6 AC093926.2-201ENSMUST00000214468 1228 ntBASIC18.86■□□□□ 0.61
Stag1Q9D3E6 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Stag1Q9D3E6 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Stag1Q9D3E6 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Stag1Q9D3E6 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC18.86■□□□□ 0.61
Stag1Q9D3E6 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Stag1Q9D3E6 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Stag1Q9D3E6 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Stag1Q9D3E6 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Stag1Q9D3E6 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
Stag1Q9D3E6 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC18.86■□□□□ 0.61
Stag1Q9D3E6 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Stag1Q9D3E6 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Stag1Q9D3E6 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Stag1Q9D3E6 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC18.85■□□□□ 0.61
Stag1Q9D3E6 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Stag1Q9D3E6 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Stag1Q9D3E6 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Stag1Q9D3E6 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Stag1Q9D3E6 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Stag1Q9D3E6 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Stag1Q9D3E6 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
Stag1Q9D3E6 Gm15358-201ENSMUST00000119249 520 ntBASIC18.85■□□□□ 0.61
Stag1Q9D3E6 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC18.85■□□□□ 0.61
Stag1Q9D3E6 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC18.85■□□□□ 0.61
Stag1Q9D3E6 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Stag1Q9D3E6 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Stag1Q9D3E6 Gm43575-201ENSMUST00000196420 516 ntBASIC18.85■□□□□ 0.61
Stag1Q9D3E6 Gm45167-201ENSMUST00000208007 322 ntBASIC18.85■□□□□ 0.61
Stag1Q9D3E6 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Stag1Q9D3E6 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Stag1Q9D3E6 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms