Protein–RNA interactions for Protein: Q9CZN7

Shmt2, Serine hydroxymethyltransferase, mousemouse

Known RBP Predictions only

Length 504 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt2Q9CZN7 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Shmt2Q9CZN7 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Shmt2Q9CZN7 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Shmt2Q9CZN7 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Shmt2Q9CZN7 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Shmt2Q9CZN7 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Shmt2Q9CZN7 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Shmt2Q9CZN7 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Shmt2Q9CZN7 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC15.21■□□□□ 0.03
Shmt2Q9CZN7 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Shmt2Q9CZN7 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Shmt2Q9CZN7 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Shmt2Q9CZN7 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Shmt2Q9CZN7 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Shmt2Q9CZN7 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Shmt2Q9CZN7 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Shmt2Q9CZN7 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC15.21■□□□□ 0.03
Shmt2Q9CZN7 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Shmt2Q9CZN7 Gm29518-201ENSMUST00000190858 372 ntBASIC15.21■□□□□ 0.03
Shmt2Q9CZN7 Gm17808-201ENSMUST00000200859 894 ntBASIC15.21■□□□□ 0.03
Shmt2Q9CZN7 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Shmt2Q9CZN7 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Shmt2Q9CZN7 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Shmt2Q9CZN7 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Shmt2Q9CZN7 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Shmt2Q9CZN7 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Shmt2Q9CZN7 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Shmt2Q9CZN7 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Shmt2Q9CZN7 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Shmt2Q9CZN7 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Shmt2Q9CZN7 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Shmt2Q9CZN7 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Shmt2Q9CZN7 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
Shmt2Q9CZN7 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Shmt2Q9CZN7 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC15.21■□□□□ 0.02
Shmt2Q9CZN7 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
Shmt2Q9CZN7 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Shmt2Q9CZN7 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC15.2■□□□□ 0.02
Shmt2Q9CZN7 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Shmt2Q9CZN7 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Shmt2Q9CZN7 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Shmt2Q9CZN7 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Shmt2Q9CZN7 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Shmt2Q9CZN7 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Shmt2Q9CZN7 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Shmt2Q9CZN7 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Shmt2Q9CZN7 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Shmt2Q9CZN7 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Shmt2Q9CZN7 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Shmt2Q9CZN7 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Shmt2Q9CZN7 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Shmt2Q9CZN7 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC15.2■□□□□ 0.02
Shmt2Q9CZN7 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC15.2■□□□□ 0.02
Shmt2Q9CZN7 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Shmt2Q9CZN7 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC15.2■□□□□ 0.02
Shmt2Q9CZN7 Gm33142-201ENSMUST00000193913 867 ntBASIC15.2■□□□□ 0.02
Shmt2Q9CZN7 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC15.2■□□□□ 0.02
Shmt2Q9CZN7 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Shmt2Q9CZN7 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Shmt2Q9CZN7 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC15.2■□□□□ 0.02
Shmt2Q9CZN7 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Shmt2Q9CZN7 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC15.2■□□□□ 0.02
Shmt2Q9CZN7 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Shmt2Q9CZN7 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC15.2■□□□□ 0.02
Shmt2Q9CZN7 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC15.2■□□□□ 0.02
Shmt2Q9CZN7 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
Shmt2Q9CZN7 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Shmt2Q9CZN7 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC15.2■□□□□ 0.02
Shmt2Q9CZN7 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Shmt2Q9CZN7 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Shmt2Q9CZN7 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Shmt2Q9CZN7 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Shmt2Q9CZN7 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Shmt2Q9CZN7 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Shmt2Q9CZN7 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Shmt2Q9CZN7 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Shmt2Q9CZN7 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Shmt2Q9CZN7 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Shmt2Q9CZN7 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Shmt2Q9CZN7 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Shmt2Q9CZN7 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Shmt2Q9CZN7 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC15.19■□□□□ 0.02
Shmt2Q9CZN7 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Shmt2Q9CZN7 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC15.19■□□□□ 0.02
Shmt2Q9CZN7 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Shmt2Q9CZN7 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Shmt2Q9CZN7 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Shmt2Q9CZN7 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
Shmt2Q9CZN7 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC15.19■□□□□ 0.02
Shmt2Q9CZN7 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
Shmt2Q9CZN7 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Shmt2Q9CZN7 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Shmt2Q9CZN7 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Shmt2Q9CZN7 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
Shmt2Q9CZN7 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Shmt2Q9CZN7 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Shmt2Q9CZN7 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Shmt2Q9CZN7 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Shmt2Q9CZN7 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Shmt2Q9CZN7 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms