Protein–RNA interactions for Protein: Q9CYW4

Hdhd3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, mousemouse

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdhd3Q9CYW4 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hdhd3Q9CYW4 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hdhd3Q9CYW4 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hdhd3Q9CYW4 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hdhd3Q9CYW4 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hdhd3Q9CYW4 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Hdhd3Q9CYW4 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hdhd3Q9CYW4 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hdhd3Q9CYW4 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Hdhd3Q9CYW4 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hdhd3Q9CYW4 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Hdhd3Q9CYW4 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hdhd3Q9CYW4 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hdhd3Q9CYW4 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hdhd3Q9CYW4 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hdhd3Q9CYW4 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hdhd3Q9CYW4 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hdhd3Q9CYW4 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hdhd3Q9CYW4 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Hdhd3Q9CYW4 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Hdhd3Q9CYW4 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC12.96□□□□□ -0.33
Hdhd3Q9CYW4 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hdhd3Q9CYW4 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hdhd3Q9CYW4 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hdhd3Q9CYW4 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Hdhd3Q9CYW4 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hdhd3Q9CYW4 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Hdhd3Q9CYW4 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hdhd3Q9CYW4 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hdhd3Q9CYW4 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC12.96□□□□□ -0.33
Hdhd3Q9CYW4 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hdhd3Q9CYW4 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC12.96□□□□□ -0.33
Hdhd3Q9CYW4 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC12.96□□□□□ -0.33
Hdhd3Q9CYW4 Gm44878-201ENSMUST00000205812 1295 ntBASIC12.96□□□□□ -0.33
Hdhd3Q9CYW4 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hdhd3Q9CYW4 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hdhd3Q9CYW4 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC12.96□□□□□ -0.33
Hdhd3Q9CYW4 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hdhd3Q9CYW4 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hdhd3Q9CYW4 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hdhd3Q9CYW4 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC12.96□□□□□ -0.34
Hdhd3Q9CYW4 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Hdhd3Q9CYW4 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Hdhd3Q9CYW4 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Hdhd3Q9CYW4 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Hdhd3Q9CYW4 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Hdhd3Q9CYW4 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Hdhd3Q9CYW4 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Hdhd3Q9CYW4 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Hdhd3Q9CYW4 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hdhd3Q9CYW4 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Hdhd3Q9CYW4 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hdhd3Q9CYW4 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hdhd3Q9CYW4 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Hdhd3Q9CYW4 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Hdhd3Q9CYW4 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Hdhd3Q9CYW4 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hdhd3Q9CYW4 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Hdhd3Q9CYW4 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hdhd3Q9CYW4 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hdhd3Q9CYW4 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Hdhd3Q9CYW4 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hdhd3Q9CYW4 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hdhd3Q9CYW4 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hdhd3Q9CYW4 Gm5643-201ENSMUST00000117081 966 ntBASIC12.95□□□□□ -0.34
Hdhd3Q9CYW4 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Hdhd3Q9CYW4 Gm13186-201ENSMUST00000118031 316 ntBASIC12.95□□□□□ -0.34
Hdhd3Q9CYW4 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC12.95□□□□□ -0.34
Hdhd3Q9CYW4 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hdhd3Q9CYW4 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC12.95□□□□□ -0.34
Hdhd3Q9CYW4 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hdhd3Q9CYW4 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hdhd3Q9CYW4 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hdhd3Q9CYW4 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hdhd3Q9CYW4 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hdhd3Q9CYW4 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Hdhd3Q9CYW4 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hdhd3Q9CYW4 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hdhd3Q9CYW4 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hdhd3Q9CYW4 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Hdhd3Q9CYW4 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hdhd3Q9CYW4 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Hdhd3Q9CYW4 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hdhd3Q9CYW4 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC12.94□□□□□ -0.34
Hdhd3Q9CYW4 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Hdhd3Q9CYW4 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Hdhd3Q9CYW4 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Hdhd3Q9CYW4 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hdhd3Q9CYW4 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Hdhd3Q9CYW4 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hdhd3Q9CYW4 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Hdhd3Q9CYW4 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hdhd3Q9CYW4 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hdhd3Q9CYW4 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hdhd3Q9CYW4 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hdhd3Q9CYW4 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hdhd3Q9CYW4 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Hdhd3Q9CYW4 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hdhd3Q9CYW4 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC12.94□□□□□ -0.34
Hdhd3Q9CYW4 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms