Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smc3Q9CW03 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Smc3Q9CW03 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smc3Q9CW03 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Smc3Q9CW03 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC18.71■□□□□ 0.59
Smc3Q9CW03 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smc3Q9CW03 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smc3Q9CW03 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smc3Q9CW03 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Smc3Q9CW03 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Smc3Q9CW03 Gm10052-201ENSMUST00000168019 960 ntBASIC18.71■□□□□ 0.59
Smc3Q9CW03 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC18.71■□□□□ 0.59
Smc3Q9CW03 AC153881.2-201ENSMUST00000214877 204 ntBASIC18.71■□□□□ 0.59
Smc3Q9CW03 Gm7729-201ENSMUST00000050143 801 ntBASIC18.71■□□□□ 0.59
Smc3Q9CW03 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
Smc3Q9CW03 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smc3Q9CW03 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smc3Q9CW03 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.58
Smc3Q9CW03 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Smc3Q9CW03 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC18.7■□□□□ 0.58
Smc3Q9CW03 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smc3Q9CW03 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smc3Q9CW03 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Smc3Q9CW03 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Smc3Q9CW03 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Smc3Q9CW03 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smc3Q9CW03 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smc3Q9CW03 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Smc3Q9CW03 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smc3Q9CW03 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
Smc3Q9CW03 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smc3Q9CW03 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smc3Q9CW03 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smc3Q9CW03 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Smc3Q9CW03 AC163637.1-201ENSMUST00000215491 1894 ntBASIC18.7■□□□□ 0.58
Smc3Q9CW03 Gm18101-201ENSMUST00000215769 548 ntBASIC18.7■□□□□ 0.58
Smc3Q9CW03 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smc3Q9CW03 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Smc3Q9CW03 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Smc3Q9CW03 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Smc3Q9CW03 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC18.7■□□□□ 0.58
Smc3Q9CW03 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smc3Q9CW03 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smc3Q9CW03 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smc3Q9CW03 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC18.7■□□□□ 0.58
Smc3Q9CW03 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Smc3Q9CW03 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
Smc3Q9CW03 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC18.69■□□□□ 0.58
Smc3Q9CW03 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC18.69■□□□□ 0.58
Smc3Q9CW03 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smc3Q9CW03 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smc3Q9CW03 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Smc3Q9CW03 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smc3Q9CW03 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Smc3Q9CW03 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Smc3Q9CW03 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC18.69■□□□□ 0.58
Smc3Q9CW03 Gm44430-201ENSMUST00000203376 995 ntBASIC18.69■□□□□ 0.58
Smc3Q9CW03 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC18.69■□□□□ 0.58
Smc3Q9CW03 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smc3Q9CW03 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Smc3Q9CW03 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smc3Q9CW03 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smc3Q9CW03 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC18.68■□□□□ 0.58
Smc3Q9CW03 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smc3Q9CW03 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smc3Q9CW03 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Smc3Q9CW03 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smc3Q9CW03 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smc3Q9CW03 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smc3Q9CW03 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Smc3Q9CW03 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smc3Q9CW03 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC18.68■□□□□ 0.58
Smc3Q9CW03 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC18.68■□□□□ 0.58
Smc3Q9CW03 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Smc3Q9CW03 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smc3Q9CW03 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smc3Q9CW03 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smc3Q9CW03 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smc3Q9CW03 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Smc3Q9CW03 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smc3Q9CW03 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smc3Q9CW03 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Smc3Q9CW03 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smc3Q9CW03 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC18.68■□□□□ 0.58
Smc3Q9CW03 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC18.68■□□□□ 0.58
Smc3Q9CW03 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smc3Q9CW03 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smc3Q9CW03 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Smc3Q9CW03 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smc3Q9CW03 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Smc3Q9CW03 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smc3Q9CW03 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Smc3Q9CW03 Gm6433-201ENSMUST00000118634 875 ntBASIC18.67■□□□□ 0.58
Smc3Q9CW03 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC18.67■□□□□ 0.58
Smc3Q9CW03 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Smc3Q9CW03 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Smc3Q9CW03 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Smc3Q9CW03 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smc3Q9CW03 Zkscan4-202ENSMUST00000225845 1506 ntBASIC18.67■□□□□ 0.58
Smc3Q9CW03 Asic1-205ENSMUST00000228185 1818 ntBASIC18.67■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms